Corynebacterium hansenii: CHAN_11460
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Entry
CHAN_11460 CDS
T09360
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
chan
Corynebacterium hansenii
Pathway
chan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHAN_11460
09124 Replication and repair
03420 Nucleotide excision repair
CHAN_11460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chan03021
]
CHAN_11460
03400 DNA repair and recombination proteins [BR:
chan03400
]
CHAN_11460
Enzymes [BR:
chan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHAN_11460
Transcription machinery [BR:
chan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHAN_11460
DNA repair and recombination proteins [BR:
chan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHAN_11460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
DUF7108
Motif
Other DBs
NCBI-ProteinID:
WJZ00889
LinkDB
All DBs
Position
2584350..2586026
Genome browser
AA seq
558 aa
AA seq
DB search
MSFGDGPLIVQSDKTVLLEIDHDDADAARAALAPFAELERAPEHIHTYRITPLALWNARA
AGHDAEQVVDVLEKYSRFPVPQALLIDVAETMDRYGRLTLTKHPAHGLVLESKDPAVLAE
ITRHKKIRPMLGEEIDADTWTVHPSERGRIKQELLKVGWPAGDSAGYVDGEAHDIDWVGE
HEDWELRDYQRHAADSFREGGSGVVVLPCGAGKTIVGAAAMVDAKRTTLILVTNTVAGRQ
WRDELLRRTSLTEDEIGEYSGERKEIRPVTIATYQVVTRKTKGEFRALELFDSRDWGLII
YDEVHLLPAPVFRMSADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQG
WIAPAECIEVRVTLTESERMVYATAEAADRYRLAATSPTKIPVVEKLLERHPGEPTLVIG
AYLDQLEELGRALDAPVIDGKTPNKRREELFDAFRSGELTTLVVSKVANFSIDLPEAAVA
VQVSGTFGSRQEEAQRLGRLLRPKSDGGGAIFYSVVARDTLDTEYAAHRQRFLAEQGYAY
RIADADELLGPSLPGDTL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgtccttcggcgacggccccctgatcgtccaatccgacaagacggtcctcctcgagatc
gaccacgacgacgccgatgccgcccgcgcggcgctggcgccgttcgccgagctggagcgg
gccccggagcacatccacacgtaccggatcacgccgctggccctgtggaacgcccgcgcc
gccggccacgacgccgagcaggtcgtcgacgtgctggagaagtactcgcgcttcccggtc
ccccaggcgctgctcatcgacgtcgcggagaccatggaccggtacgggcgcctgacgctg
accaagcacccggcccacgggctggtgctggagtcgaaggatccggcggtgctggcggag
atcacccgccacaagaagatccgcccgatgctcggcgaggagatcgacgccgacacgtgg
accgtgcacccgtcggagcgcggccgcatcaagcaggagctgctcaaggtcggttggccg
gcgggcgactccgcgggctacgtcgacggcgaggcccacgacatcgattgggtcggcgag
cacgaggactgggagctgcgcgactaccagcgccacgccgccgattccttccgcgagggc
ggttcgggcgtggtggtgctgccctgcggcgccggcaagacgatcgtcggcgcggccgcc
atggtcgacgccaagcgcacgacgctgatcctggtgaccaacaccgtcgccggccgccag
tggcgcgacgagctgctgcggcggacgtcgctgacggaggacgagatcggcgagtactcc
ggggagcgcaaggagatccgcccggtgaccatcgccacctaccaggtggtcacccgcaag
acgaagggcgagttccgcgcgctggagctgttcgactcccgcgactgggggctgatcatc
tacgacgaggtccatctgctgcccgcgccggtgttccgcatgagcgcggatctgcagtcg
cggcgccgcctgggcctgaccgccacgctggtgcgcgaggacggccgggagggcgacgtg
ttcagcctgatcggcccgaagcgctacgacgccccgtggaaggacatcgaggcgcagggc
tggatcgccccggccgagtgcatcgaggtccgcgtcaccctcaccgaatccgagcggatg
gtctacgcgaccgccgaagccgcggaccgctatcgcctggccgccacctcgcccacgaag
atcccggtcgtcgaaaagctcctggagcgccaccccggcgagccgacgctggtcatcggg
gcctacctggaccagctcgaggagctgggccgcgcgctggacgcgcccgtcatcgacggc
aagacgcccaacaagcgcagggaggagcttttcgacgccttccggtccggcgaattgacc
acgctcgtcgtctcgaaggtggccaacttctccatcgacctgccggaagccgccgtcgcg
gtgcaggtgtccggcaccttcgggtcgcgccaggaggaggcccagcgactgggccgcctg
ctgcgccccaagagcgacggcggcggggcgatcttctactccgtcgtcgcccgcgacacc
ctcgacaccgagtacgccgcccaccgccagcgcttcctcgccgagcagggctacgcctac
cgcatcgccgacgccgacgagctgctcggcccctccctgcccggggatacgctgtag
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