KEGG   Chlamydia psittaci C19/98: CPS0C_0749
Entry
CPS0C_0749        CDS       T01863                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
chc  Chlamydia psittaci C19/98
Pathway
chc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:chc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CPS0C_0749 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chc03021]
    CPS0C_0749 (rpoC)
   03400 DNA repair and recombination proteins [BR:chc03400]
    CPS0C_0749 (rpoC)
Enzymes [BR:chc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CPS0C_0749 (rpoC)
Transcription machinery [BR:chc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CPS0C_0749 (rpoC)
DNA repair and recombination proteins [BR:chc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CPS0C_0749 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Biotin_lipoyl Mei5
Other DBs
NCBI-ProteinID: AEG85723
LinkDB
Position
complement(791075..795256)
AA seq 1393 aa
MFGEGSRDNVSLSKEGLFDKLEIGIASDITIRDKWSCGEIKKPETINYRTFKPEKGGLFC
EKIFGPTKDWECCCGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPIVHIWFFK
TTPSRIGNVLGMTASDLERIIYYEEYVVIDPGKTDLNKKQLLNDAQYREVIEKWGKDSFV
AKMGGEAIYDLLKSEDLQSLLKELKDRLRKTKSQQARMKLAKRLKIIEGFVSSSNHAEWM
VLKSVPVVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR
MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRVDYSGRSVIIV
GPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSAKKMIQRGAPEVWDVLEEIIK
GHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRVHPLVCAAFNADFDGDQMAVHVPLSIEAQ
LEAKVLMMAPDNIFLPSSGKPVATPSKDMTLGIYYLMADPTYCPEEHGGKVKIFRDVTEV
LRALYSGGFLDEHTNGRRDETGRGIHIHEKIKVRIDGQVIETTPGRVLFNRIVPKELGFQ
NYSMPSKRISELILQCYKKVGLEATVRFLDDLKDLGFIQATKAAISMGLKDVKIPEIKSE
ILKEAYDKVAIVKKQYDDGIITDGERHSKTISIWTEVSELLSDALYVEISKQTKSKHNPL
FLMIDSGARGNKSQLKQLGALRGLMAKPNGAIIESPITSNFREGLTVLEYSISSHGARKG
LADTALKTADSGYLTRRLVDVAQDVIITEKDCGTLNHIEITAIRQGSEELLPLKDRIYGR
TVSEDIYQPGDKSKLLAKNGDVITSAQAELIDDAGIESIKIRSTLTCESRRGVCAKCYGL
NLANGRLIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIVTDCDGILVYMD
LRVVVGQDGNHLVLNKKGAIHVVRDEGRSLEEYKKLLSTKSIESLETYPVELGVKILVGD
GEKVTAGQRIAEVELHNIPIICDKPGFVKYEDLVEGISTEKVVNKNTGLVELIVKQHRGE
LHPQIAIYSDPGLTELVGTYAIPSGAIVSVEENQKVDPGMLLARLPRGAIKTKDITGGLP
RVAELVEARKPEDAADIAKIDGVVDFKGIQKNKRILVVRDEITGMEEEHLIPLTKHLIVQ
RGDHVMKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDINDKHVEIIVRQ
MLQKVRITDPGDTTLLFGEEVNKKEFYEENKRTEEEGGKPAQAVPVLLGITKASLGTESF
ISAASFQDTTRVLTDAACSSKTDYLLGFKENVIMGHMIPGGTGFDTHKRIKQYLEKEQEE
LVFDFVSESECAC
NT seq 4182 nt   +upstreamnt  +downstreamnt
atgtttggagaaggttctcgagacaatgtctctctatctaaagaggggctatttgataaa
ttagaaattggaattgcctcagatattactattcgcgataagtggtcttgtggggaaatc
aagaagcctgaaacaatcaattaccgtacgtttaaacctgaaaaaggtggactattttgc
gaaaagatttttggtcccacaaaggattgggaatgctgttgtggtaaatacaagaagatt
aagcataaaggtattgtttgtgatcgctgcggagtagaggttactctttctaaggttcgt
cgtgaacgtatggctcatattgagctggctgtgcctatcgtacatatatggttttttaag
actacaccatcaagaataggtaacgtcttaggaatgaccgcttctgatcttgaaaggatt
atttattacgaagaatatgtagttatcgatccaggtaagacagatttaaataaaaagcag
cttttaaatgatgctcagtatcgagaagtcattgagaagtggggaaaagattctttcgta
gccaaaatgggcggagaggctatctatgatttattgaaatcagaagatcttcaaagtcta
ttaaaagagcttaaggatcgtttgcgaaaaaccaaatctcagcaagccagaatgaaactt
gctaagcgattaaaaattatcgaaggttttgtctcttcttcgaatcacgctgagtggatg
gttttaaaaagtgttcctgtcgttccacccgatctacgtcctttagttccattagatggt
ggaaggtttgcaacttctgatttaaatgatctataccgtcgtgtaattaaccgaaataat
cgtttaaaagctattttaaggctaaaaactcctgaagtgatcgtacgtaatgaaaaacgt
atgttacaggaagccgtggacgctctatttgataacggtcgtcatggacaccctgtcatg
ggagcagggaatcgtccattaaaatccctttctgaaatgctaaaagggaaaaatggacgc
ttccgacaaaatcttttaggtaagcgtgttgattattctggacgttctgtcattatcgta
ggtcctgaattgaagtttaatcaatgcggtttgcctaaagaaatggctcttgagttgttt
gaaccgttcattattaaaagattaaaagatcagggtagtgtctatactattcgttctgct
aagaaaatgattcaacgtggagctcctgaagtttgggatgttctagaagaaattattaaa
ggccatccagtattgcttaaccgagcccccacactccaccgtttagggatacaggcgttt
gaacctgtattaatcgaaggtaaagcgattcgtgtgcatcccctagtctgtgcagcattt
aacgcggacttcgatggagaccaaatggctgttcacgtgccgctgtctatagaagcacaa
ttagaagccaaagttttgatgatggctcctgataacatcttcttgccgtcttctggaaag
cctgtcgctacaccttctaaggatatgaccttaggtatttactatctgatggcagacccg
acatattgcccggaagagcatggaggaaaagtcaaaatctttagggatgttacggaagtc
ttgcgagcattgtattctggcggattcctagatgagcatacaaatggtcgtcgcgatgaa
acaggccgtggtattcatattcacgagaaaattaaagtacgcatcgatggtcaggttatt
gaaactactccaggaagagttctgtttaatagaattgttcctaaagagttagggttccaa
aactatagcatgccaagtaagcgtatcagtgaattgattttacaatgctataaaaaagta
gggcttgaggctactgtacgcttcttagatgatcttaaagatttaggatttatccaagcg
acgaaagctgcgatctctatgggattgaaagatgtaaaaattcctgagattaaaagtgaa
attcttaaagaagcttatgacaaggttgccattgttaagaaacaatatgatgatggtatt
atcaccgatggtgaacgtcattctaaaactattagtatttggacagaggtttcagaactc
ttgtcagacgctctttatgttgaaattagtaagcaaactaaaagtaaacacaaccctctg
ttcttgatgatagattcaggagctcgaggtaataagtctcagttgaagcagttaggagct
ctacgaggtttaatggctaagccaaacggtgcgattatcgaatctccgattacctcgaac
ttccgcgaaggattaaccgttcttgagtattccatttcttctcacggtgctagaaaaggt
ttagctgatactgcattgaagacagctgactctggatatttaactcgaagacttgttgac
gtagctcaagatgtcatcattacggaaaaagattgcggaacattgaatcatatcgaaatt
actgcaattcgacagggttcagaagagcttctacctttaaaagatcgtatttatggtcgt
acggtatcagaagatatctatcaacccggtgataaaagtaagcttctagctaagaatgga
gatgtgattacatctgctcaggctgaacttattgatgatgctggaattgaaagtattaaa
atccgctctacacttacttgtgaaagtcgtcgtggtgtttgtgctaagtgttatgggtta
aaccttgctaatggtcgtctgattggtttaggagaagctgtgggtattatagctgctcaa
tccattggtgaacctggaacacagctaacgatgagaacgttccaccttggaggtatcgca
gctacatcttcaactccagaaattgttacagattgtgacggtatcctagtatacatggat
ctacgtgtggttgtgggtcaagatggaaatcacttagtcttgaataagaaaggtgctatc
catgttgtccgtgatgaaggacgtagtttagaagagtacaagaaacttctaagcaccaag
tctatagaaagtttagagacttatccggtagaactcggtgttaagattttagtaggtgat
ggggagaaggtaactgcaggccaaagaattgctgaggtcgagttacataatattccaatt
atctgtgataagcctggttttgtaaaatacgaagacttagtagagggtatttctacagag
aaagtagttaataagaacacaggtttagtcgagcttattgttaaacagcatcgtggagaa
ctgcatcctcaaattgctatttattctgatcccggtttgacggaattggttggaacatac
gctattccttctggagcgattgtttctgtcgaagaaaatcaaaaagtcgaccctggtatg
ttattagcaagattacctcgaggggcaattaagactaaggatattactggaggtctacct
agggttgctgaattagttgaagctcgtaagcctgaagacgctgcagatattgcaaagatt
gatggtgttgtagactttaaaggaattcagaaaaataaacgtattcttgttgttcgtgac
gaaataacaggaatggaagaagaacatctgattcctttgaccaagcacttgattgttcaa
cgtggagatcatgtgatgaagggacagcagctaacagatggtttggttgttccacatgaa
atcctagaaatttgtggcgttcgcgaattgcaaaagtacttagtcaatgaggttcaagaa
gtttatcgtttacagggtgtagacatcaatgataagcatgtagaaatcattgttcgtcaa
atgttgcagaaggttcgcattactgatccaggtgatactactttactcttcggagaagaa
gtaaataaaaaagaattctacgaagagaataaacgtacagaagaggaaggtggaaaacca
gcacaagctgttccagtattattgggaattaccaaagcttcgttgggtacagaatccttt
atttctgccgcatccttccaagatacgactcgggtattaactgatgctgcgtgtagtagt
aaaactgactacctgttaggattcaaagagaatgtcattatggggcatatgattcctgga
ggtacagggtttgatacacacaagcgtattaagcagtacttagaaaaggaacaagaggaa
cttgtctttgactttgtaagcgaatctgaatgcgcttgttag

DBGET integrated database retrieval system