Chlamydia psittaci C19/98: CPS0C_1066
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Entry
CPS0C_1066 CDS
T01863
Symbol
topA
Name
(GenBank) DNA topoisomerase I/SWI domain fusion protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chc
Chlamydia psittaci C19/98
Brite
KEGG Orthology (KO) [BR:
chc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chc03032
]
CPS0C_1066 (topA)
03400 DNA repair and recombination proteins [BR:
chc03400
]
CPS0C_1066 (topA)
Enzymes [BR:
chc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPS0C_1066 (topA)
DNA replication proteins [BR:
chc03032
]
Prokaryotic type
DNA Topoisomerases
CPS0C_1066 (topA)
DNA repair and recombination proteins [BR:
chc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPS0C_1066 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
SWIB
Toprim
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-ProteinID:
AEG86012
LinkDB
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Position
1143935..1146502
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AA seq
855 aa
AA seq
DB search
MESPAKIKTLQKLLGKGFIFASSLGHVVDLPAKEFGIDIEHDFEPDYQVLPDKQEVISQI
CKLASSCDIVYLSPDPDREGEAIAWHIANQLPENTHIQRISFNAITKGAVNEALKHPREI
DMALVNAQQARRLLDRIVGYKISPILSRKLQQRSGISAGRVQSVALKLVVDREKAIEAFV
PTEYWNVRVFLQDPKTSKTFWAHLYSADGKKWEKELPKGKTEDEILLINSETQAQHYVDL
LEDASYRVTRVEAKEKRRNAAPPFITSTLQQEASRHFRFSSSKTMSVAQTLYEGVELDNE
DATGLITYMRTDSVRIDPEALNNVRDYIHNTFGQEYLPKSPNVYTTKKMTQDAHEAIRPT
DIHLSPDKLEGKLSDDQLKLYSLIWKRFVASQMNPAIYDTLAMTISTNVKIDLRASGSLL
KFKGFLAVYEEKLDDDTTEEENLSLPQLHAQDVLDKEKVSAEQAFTKPLPRFTEASLVKE
LEKSGIGRPSTYATIMNKIQSREYTIKENQRLRPTELGKIISQFLETNFPRIMDIGFTAL
MEDELELIADNKKSWKLLLKEFWDQFLPVVTTAEKEAVIPRVITDIECSACHKGKLVKIW
AKNRYFYGCSEYPECDFKTSEEELAFNKDDYAVDTPWNSPCPVCGGEMKVRHGRFGTFLG
CFNYPQCRGTISIHKKGEEVEQEEAIPCPAIGCSGKILKKRSRYNKTFYSCSEYPDCSVI
GNTIDAVITKYTGTAKTPYEKKTTGKKKATTKSSSKTTKTTAKKKKSEGKTPKTPKAGAL
LTPSPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDM
FQLPKLLNQHLFKSD
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
gtggaatctcccgctaaaattaaaaccttgcaaaaactcttagggaaaggttttattttt
gcttcctcactaggacatgttgttgaccttcccgccaaggaatttggtatcgatatcgaa
catgatttcgaacctgactatcaagttcttcctgataaacaagaagttatcagtcaaatt
tgtaaattagcctccagttgtgatattgtctatctctctcctgacccggaccgagaagga
gaagcgattgcctggcatattgcaaatcagcttcctgaaaatacgcatatccaaaggata
tccttcaatgcaattaccaaaggtgctgttaatgaagctctaaagcatcctcgagaaatc
gatatggctttagtaaatgctcaacaagctcgtcgcctgttagatcgtatcgttggttat
aaaatttctcctattttaagtcgtaagctacaacaaagatcgggtatatctgcaggacgc
gtgcaatccgtagcactcaagcttgtcgttgatcgtgaaaaagctatcgaagcctttgta
cctaccgaatattggaatgtgcgtgttttcctccaagaccctaaaacatctaagacattc
tgggcccacctatattctgctgacgggaaaaagtgggaaaaagaactccctaaggggaaa
accgaagatgaaattttattaattaactctgaaactcaagctcaacattatgttgatctg
ttagaagacgcttcctatagagtgactcgcgtagaagcgaaagaaaaacgacgtaatgcc
gcgccaccatttattacatccaccttgcaacaagaagcaagtcgtcatttcagattttct
tcttctaaaacgatgtcagtagctcagacattatatgaaggtgtcgagttagataacgaa
gatgctacaggattaattacttatatgcgtacagattctgtacgtattgatcctgaggca
ttaaataacgtcagagattatatacacaacacatttgggcaagaataccttccgaagtct
cctaatgtctacacgacaaaaaagatgactcaagacgcccatgaagctattcgccctaca
gacatccatttatctcccgataagcttgaagggaaactctccgatgatcaactcaagctt
tattctcttatttggaaacgttttgttgcttcccagatgaatcctgcgatttatgataca
ttagcaatgacgatttcaacgaatgtaaaaatagatttgcgtgcttctggatcattattg
aaatttaaaggttttctcgcggtatacgaagaaaagctggatgatgatacaaccgaagaa
gaaaatctatcgcttcctcaactacacgcccaggacgttttagataaggaaaaggtttca
gcagaacaagcttttacaaaacccctaccgaggtttacagaagcttctttagtaaaagag
ttagaaaaatccggcattggccgcccctctacatacgcaacgattatgaataaaattcaa
agtcgtgagtatactattaaggaaaatcagcggttacgccctacagaactcgggaaaatt
atctcgcaatttcttgagaccaactttcctcggattatggacataggttttacagctctt
atggaagatgagctagagcttattgctgataataaaaagtcttggaaattacttcttaaa
gaattttgggaccaatttcttcctgtagtcactactgcagaaaaagaagctgttatccct
cgcgtgataaccgatatcgaatgttccgcatgtcacaaaggaaaacttgttaaaatctgg
gcaaaaaatcgttatttttacggatgttcagaataccctgagtgtgattttaaaacttct
gaagaagaacttgctttcaacaaagacgattatgctgttgatacaccttggaatagcccc
tgccctgtttgcggtggggagatgaaagtccgccacggacgttttggaacatttttagga
tgcttcaactatcctcaatgccgtggaacgatttccattcataagaaaggtgaggaagta
gaacaagaagaagctattccttgtcctgccattggttgctcagggaaaattttaaagaaa
cgttctcgttacaataaaacattctattcttgctcagaatatcctgactgcagtgtgata
ggcaacactatagatgctgttattacaaagtacacaggaactgcaaaaacaccctacgaa
aagaaaaccacagggaagaaaaaagccactacaaaatccagcagcaaaacgactaaaaca
actgctaaaaaaaagaaaagcgaaggaaagactccaaaaacccctaaagcaggagcttta
cttacaccatctcctcaactagctctgatgattggcccggaacctgtaggacgtggagaa
gccacaaagaaagtctggcaatacatcaaggaccataatctacaatcccctgagaataaa
aagatgttgctgcccgacgagaagtttgaagcaattattggcccggaacctgtagatatg
ttccaattgccaaaactactcaatcagcatttattcaaatctgattaa
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