Caldicellulosiruptor hydrothermalis: Calhy_0321
Help
Entry
Calhy_0321 CDS
T01346
Name
(GenBank) TRAG family protein
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Calhy_0321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DUF87
AAA_10
FtsK_SpoIIIE
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADQ06069
UniProt:
E4QBG7
LinkDB
All DBs
Position
391354..393231
Genome browser
AA seq
625 aa
AA seq
DB search
MKKAFGIVAILVIYYLMMAYLIGMFSGAISQDAWEQLMAGKSPKIVIQTDPVAALGNVFH
SPAVLKVWLGVATVLLVVAGVFIFAYRDELKIHFGKEVPADERGTYGTADWMKIKEAKKV
FRFGSEQKGILLGKVNGQRVVLPADTKYNKHIAIFGAPGTGKSRTFARPNIIQIAKMGQS
MIITDPKGELFEDMAVWLEQQGYDVKALNLVNIECSDRWNPLDAVADDMDATVFADVVIR
NTQAGMRKAGGDPFWDRAELNLLKALVLYIKETRPAQEQNLGELYRLLATTNMAGLQSMF
MSIPNDRASKMAYNIFAQASEQVRTGVIIGLGTRLQVFQNRLVQKMTEVSDIDLEAPKKR
KVAYFCIISDTHRAFSFLSSLFFSFLFIKLVNLHDTTTDPEIRAREVYFLLDEFPNIGEI
PDFQEKIATIRSRRLHCSIIFQSLGQLEKIYPLDWENIIGCCDTKYFLGANDLKTAEYVS
ELLGTKSIHTRSVSRQGGLEGLTEIERITQSVGKRQLLTQDEVLRFENEKAIVMVRGHKP
LIVEKVDISELKESKQLTIRAIKDYLRPWAAEVTGNTTAGQVCDAGAQSQINTDQSQTTF
TTPPENSADSSEGNKQQETGEDELL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcgtttgggattgtagcgatactggtgatttactatttgatgatggcgtat
ttgatagggatgttcagcggtgcaatatcacaggacgcatgggaacagctcatggcaggg
aagagtccaaagatagtgatacagaccgacccggtagcagcgctgggcaatgtatttcac
agtccagcagttttaaaggtctggcttggtgttgctactgtcctactggtggtagcagga
gtattcatatttgcttacagagacgagttgaagatacattttggcaaggaagtaccagca
gatgagcgtgggacgtacggaacagcggactggatgaagataaaggaagcgaagaaggta
ttcaggtttggcagcgagcaaaaaggaatactgctgggcaaggtaaatggacagagggta
gtgctgccagcagacacgaaatacaacaagcacatagcaatctttggagcaccgggaaca
gggaagtcaaggacgtttgcaagaccgaatattatccagatagcgaagatgggacagagc
atgataatcaccgacccgaaaggggaattgtttgaagacatggcagtgtggcttgaacag
caggggtacgatgtgaaggcattgaaccttgtcaacatcgaatgttcggacaggtggaat
ccgctggacgcagtagctgacgacatggacgcaacagtgtttgcggatgttgtaatacga
aacacacaggcagggatgagaaaggcaggtggcgacccgttctgggacagggcggagctg
aacctgctcaaggcgctggtgctgtacattaaggagacgagaccggcgcaggaacagaat
ttaggggagttgtacaggcttttagcgacgacgaacatggcagggctgcagagcatgttt
atgagtataccgaacgaccgtgcgtcaaagatggcatacaatatatttgcacaggcaagt
gaacaggtaagaactggtgttatcataggacttggcacaagactgcaggtattccagaac
aggcttgtccagaaaatgacagaagtgagtgacatagatttagaagcaccaaagaaaagg
aaggtagcgtacttttgtatcataagcgacacacatagagcgttcagtttcttgagctca
ctgtttttcagtttcctgtttatcaagcttgtgaacctgcacgatacaacaacagatcca
gagataagagcaagggaagtgtacttcctgctagacgagtttccgaacattggtgagata
ccggattttcaggagaagatagcgacgattcgttccaggagactgcactgcagtattatc
tttcagagtttagggcagcttgagaagatatacccgctggactgggaaaacataatagga
tgttgtgacacgaagtattttttgggggcgaacgatttgaagacggcggagtatgtatcg
gaactgcttggcacgaaatcaatacacacacggtcggtatcaaggcagggcggactggaa
ggcctgacagagatagaacgaataacacagtcagttggtaaaagacaacttttgacacag
gatgaagtgctgagatttgagaacgagaaagcgatagtgatggtaaggggacacaaaccg
ttgatagtagagaaagttgacataagcgaattgaaggagagtaaacaattaaccatccgg
gcaataaaagactatttgagaccgtgggcagcagaagttactggaaacacaactgcaggg
caagtttgcgacgcaggagcacaatcacagataaacactgaccagtcacaaactacattt
acaacaccaccagagaatagtgcagatagttcagaagggaacaaacaacaggaaacagga
gaagatgaattgctataa
DBGET
integrated database retrieval system
