Caldicellulosiruptor hydrothermalis: Calhy_0539
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Entry
Calhy_0539 CDS
T01346
Name
(GenBank) transcriptional regulator, GntR family with LacI sensor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chd03000
]
Calhy_0539
Transcription factors [BR:
chd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Calhy_0539
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_11
HTH_41
HTH_DeoR
Rrf2
HTH_28
Fe_dep_repress
Acetyltransf_4
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
ADQ06280
UniProt:
E4QCR1
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Position
592417..593511
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AA seq
364 aa
AA seq
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MIKINLYGQDDDKMSKTKYEIIKDFIIEGINSGKFKEGEKIYSENMLSRKFKVSRHTVRR
AIMELEFEGLLVSQKGRGTFVAKKSADSSKCIAVLTTFISDYIFPLIIRGIEKVIAHEGY
GLLLFSTDNSYEFERYHLESIINNPNIDAVIIEPTKSTLPSKNQELYRKLIQKDIPVIFI
NTILEEIAQNYIITKDQSAVYRLTCSLIKSGCKKLLGIFKGDDLQGIKRYSGFEKACREA
QAEFDAIFFTSEEYNFVHNRAAEVISRERFDAAVCYNDKIALPLCVKLKEMGFRIPQDIS
VTGYDNSLLSTLTDIKLTTVEHPKEKLGEMAAKAAVAMIKKNRKGVKEEVECEIIFRNST
KGGF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaataaacttgtatggacaagatgatgataaaatgagcaaaaccaaatatgag
attataaaagatttcattattgaaggaattaactctggcaagttcaaagagggcgagaaa
atttattcagagaatatgctatcacgaaagttcaaagtttcgcggcacactgtaagaaga
gctataatggagctcgaatttgaaggacttttggtgtcgcagaaaggaagaggcacgttt
gttgcaaagaaaagtgcagacagctctaaatgcattgctgttctgacaacatttatatca
gactacatctttcccctgattataagaggaattgaaaaggtgatagcacatgaagggtac
ggtcttttgctgttttcgactgacaacagctatgaatttgaaagatatcacttggagagc
ataataaacaacccaaacatagacgctgtcataatagaaccaacaaaaagtaccttgcct
tccaaaaatcaagagctttatagaaaactcatacaaaaagacatccctgtgattttcatc
aatactattttagaagaaattgctcaaaactacataataaccaaagaccagtcagctgtt
tacaggcttacatgcagcctcataaaaagcggttgcaaaaagcttcttggcattttcaaa
ggcgacgatttgcaagggataaaaagatacagtggttttgaaaaagcgtgcagggaggca
caggcagagtttgatgcaatctttttcacaagtgaggagtataattttgttcataacaga
gctgctgaagtcatatcaagagagagatttgatgcagccgtttgctacaacgacaagatt
gcccttcctctttgtgtaaagctaaaagaaatgggatttagaattcctcaggatatatct
gttacaggatatgacaactcacttctttctacactgacagatataaagctcacaactgtt
gagcatccaaaagaaaagcttggagagatggcagcaaaggcagcagttgccatgataaag
aagaatagaaaaggtgtcaaggaagaggttgaatgtgagataatcttcagaaattcaaca
aaaggaggattttga
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