Caldicellulosiruptor hydrothermalis: Calhy_0896
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Entry
Calhy_0896 CDS
T01346
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chd02044
]
Calhy_0896
02035 Bacterial motility proteins [BR:
chd02035
]
Calhy_0896
Secretion system [BR:
chd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Calhy_0896
Bacterial motility proteins [BR:
chd02035
]
Pilus system
Pilus assembly proteins
Calhy_0896
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
FumaraseC_C
AAA_16
AAA_14
nSTAND3
AAA_11
AAA_30
AAA_23
ABC_tran
Rad17
AAA
cobW
ATPase_2
AAA_19
AAA_7
NPHP3_N
DEAD
DUF87
FtsK_SpoIIIE
AAA_29
AAA_33
ResIII
AAA_18
Zeta_toxin
SRP54
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ADQ06625
UniProt:
E4Q7B2
LinkDB
All DBs
Position
932382..934064
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AA seq
560 aa
AA seq
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MVAGKKRLGELLVEAGLITQEQLQKALSLQKSTGKKLGEILVEQGFVTEDEIVEVLEFQL
GIPHIKLDQYNIDQEAVSLVSENIAKRHTLIPIKVEGDKIYVAMADPLNIFAIEDVAIYS
GKNVQPVIAKAGDIKRAIERFYGKQEALRVAEELNKEASQRKPQRLVISSDEEQETPVVK
LVNSIFEQAITLRASDIHIEPFENEVKIRFRIDGVLYDILKLEPSVLSSLIARIKVIGNM
DIAEKRIPQDGRTTFYFDNRQYDMRISSLPTIYGEKLVIRIADKSSFIKSKLELGFTDDD
LEKYNRIISSPHGIILVCGPTGSGKTTTLYTILNELNTGTKNIITVEDPVESTIYGINQV
EINPKVGLTFASVLRSILRQDPDIIMIGEIRDRETAEIAIRAAITGHLVLSTIHTNDAPS
AITRLIDMGIENFLIGSAVVGVISQRLVRKICPNCKTAYIPDISELNTLGIKDNKDTKLY
KGRGCAFCNHKGYYGRTGIYEILLMSKELKKYIAKNASSDEIREIAIKEGMKTLKEACIA
KVLEGVTTVEEFVKATYTLD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggtagcaggcaaaaaacgcttaggagagttgttggtagaagcaggattgatcactcaa
gagcagcttcaaaaggctttaagtctccaaaagtctacgggaaagaaattgggtgaaatt
ttagttgaacaaggttttgtgacagaagatgagattgtagaagttttagaatttcaattg
ggaattccccacataaaacttgatcaatacaatattgatcaggaagcagtgagtctggtt
tcagaaaacattgccaaaagacatacgttaattcccataaaagttgaaggtgataagatt
tatgttgctatggcagatcctcttaatatatttgcaattgaggatgtggcaatatatagc
ggtaagaatgttcagccagttatagccaaggctggtgatatcaaaagagcgattgaaaga
ttttatggaaaacaggaggcattaagagttgcagaggaactgaacaaagaagcatctcaa
aggaagccacaacgattagtaatttcttctgatgaggagcaggaaactcctgttgtaaag
cttgttaattccatatttgagcaggcaataacactgcgggcaagtgacatacatattgag
ccttttgagaatgaagtgaaaataagattcagaattgatggggtattgtatgatattttg
aagttagagccaagtgttttatcgtcattgattgcacgaataaaggttattggaaatatg
gatatagctgaaaaaagaattccccaagatggtagaacaacattttactttgataataga
caatatgatatgcgaatttcatccttacccaccatttatggagagaaacttgtaataaga
atagctgataagagttcatttattaaatcaaaacttgaactgggatttacagatgatgat
ttagaaaaatataatagaatcatttcttccccgcatggtatcattcttgtttgcggccca
acaggtagtggtaaaacaacaaccttgtatacaattttgaatgaattgaatactggaaca
aaaaacatcattactgttgaagaccctgttgaaagtacaatttatggcataaatcaagtt
gagatcaatcccaaagtaggacttacatttgccagtgtgctgaggtctatcttgcgacaa
gaccccgatataattatgattggtgagataagggatagagaaactgcagaaatagcaatt
agagcagcaattacaggacatcttgtgttgtctacaattcatactaatgatgctccaagt
gccattacaagactaatcgatatgggtatagagaattttttaattggttctgcagtagtg
ggtgttatatcccagcgtcttgtgagaaagatttgtccgaattgtaaaacagcatatata
ccagatatttctgagttaaacactttgggtataaaagataataaggatacaaaactttac
aaaggcagaggatgtgctttttgtaatcataagggttattatggaaggacaggaatatat
gaaattttgctgatgtcaaaagaattaaaaaaatatatagctaaaaacgcaagcagtgac
gaaattagagagatagctataaaagaagggatgaaaaccttaaaagaagcatgtatcgca
aaagtgttagaaggtgtaacaacggtagaggagtttgtgaaagcgacttacacattagat
taa
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