Caldicellulosiruptor hydrothermalis: Calhy_1110
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Entry
Calhy_1110 CDS
T01346
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Calhy_1110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_1110
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Calhy_1110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
AAA_21
Golgin_A5
DUF948
Motif
Other DBs
NCBI-ProteinID:
ADQ06832
UniProt:
E4Q8I7
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Position
1125345..1127708
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AA seq
787 aa
AA seq
DB search
MNQKTFRALEYDRILEMLISLAHSEPAKRYFQNLVPSTDKDFIQKELDKVEECFIYILKY
GRPPILEFSDISLILKKARAQAILTPHGILAVGRILKLSQEVRSYLANADGSYLKSSREK
LFYLKELTARIDQTFLTPEEILDTASPRLKEIRDRIRRLETRIRDELNRMIRDHKIQRFL
QEPIITVRGDKLLLPVKAEHKDSIKGIIHDQSATGATLFVEPFVCVEISNQIRVARSEEK
EEIERILQELSQLISRNYNEIKQNFESLSELDILFTKAQWAHQFRASKPILNTAGYINLK
KARHPLIEKERVVPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADE
GSEVCVFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEE
GAALAKAILKFLYRKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGI
PGMSNALYISSNLGLKEEIVELAKSYMSKKTLELTDIINEMERKRKELEEALESANKLKI
EAENLKRSLEEERRRFEAEKQRIKERSVKEAREFVQRVEDEVEKLFKELRKIAESLKEKE
MLKQLEEKKREYENLVKSIEQASQKEKKLQSKLPENLRLGQKVYVKSFDAEGFVESLPDS
KGNLTVRIGIMKLSVNISDVFEIEEDTTVKNLGLSSKKGVEVVQKSIDISIDVRGKTSDD
AILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSFRDGTYGEGEQGV
TVVELKD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaaagaccttcagagctttagaatatgacaggatattagaaatgttaatatct
ttagcacattctgaacctgcaaaaaggtactttcaaaatcttgtgccttcaacagacaag
gattttatccaaaaagaacttgacaaggttgaagagtgttttatctatatactaaaatat
ggaagaccgcccatattagagttttctgatatctcattgattttgaaaaaggcaagagca
caggcaattttaacaccacacggaatcttagcagtgggcagaatattaaagctttcacaa
gaggtaaggtcataccttgcaaatgcagatggtagctatctaaaaagcagtcgagagaag
ctattttatcttaaagagctcacagcccgtattgaccagacatttttgactcctgaggag
attttagacactgcatcgccaaggttaaaagagataagagacagaataagacggcttgag
acaaggataagagatgaactgaacaggatgataagagaccataaaatccagaggtttttg
caagaacctatcataacagttcgtggggataagcttttgcttcctgtgaaggctgaacac
aaagacagcatcaagggtattattcacgaccagtctgcaacaggtgcaacactttttgtt
gagccgtttgtgtgtgttgaaatttcaaaccagataagggttgcgaggtcagaagaaaaa
gaagagatagaaaggatattacaggaactctcccagcttatttcccgcaactataatgag
ataaaacaaaatttcgagagtctttctgaacttgatattctatttaccaaagcgcagtgg
gcacatcaatttcgggcttcaaagccaatcctcaacacagctggatatattaatctcaaa
aaagcaagacatccgttgattgaaaaagaaagggttgtgccaattgatgtacatttgggt
aaagaatttgacgttcttgtcattacaggaccaaacacaggtggcaagactgtgacgtta
aagaccattgggcttttctgtcttcttgctcaaagtggaatgtttctcccggcagatgaa
gggtctgaggtgtgtgtattttcaaagatatttgcagatattggcgatgagcagagcata
attcagagcctttcaactttttcagcgcatatgaaaaatataattgagataacacaaaat
gcagacagctcaacacttgttcttttggacgagattggttctggcacagaccccgaagaa
ggcgctgcgcttgccaaagcaattttaaagtttctctacagaaaaggctctaaagttgtt
gctacaacacactatggagagcttaaaacctttgctcagcaggaagagagatttgaaaac
gcttcttgtgagttcgatatcaatactttaaaaccaacatacaggcttttgattggaatt
cccggtatgagcaatgcgctttatatatcttccaatttgggtttgaaagaagagatagta
gagcttgctaaaagctacatgtctaaaaagacgctggagctgactgacattataaacgag
atggaaagaaaacgaaaagaactggaagaagccctggaaagtgcaaataaactaaagatt
gaggcagagaacttaaagagaagcttggaagaagaaagaagaaggtttgaagcagaaaaa
cagaggataaaagaaagatcagtaaaagaagcacgtgagtttgtgcaaagggttgaagat
gaggttgaaaagctattcaaagagcttaggaagattgcagagagcctgaaggaaaaagag
atgttaaaacagcttgaggagaagaagagagaatatgaaaatcttgtaaagagtatagaa
caggcatcacaaaaagagaaaaaactgcagtcaaagttacctgaaaaccttcggcttggg
caaaaggtatatgtcaaaagctttgatgcagaagggtttgttgaatcactgcctgactct
aaaggaaatctcacagttagaattggcattatgaaactttctgtgaatatatctgatgta
tttgaaatagaagaggacacgactgttaaaaacttgggattgtcttcaaaaaaaggtgtt
gaagttgttcaaaagagtattgacatttccattgatgttagaggaaaaacaagtgatgat
gccattttagaggttgacaagtatttggatgacgcatacacagcgggactaaaacaggtg
acaataatccatggaaaaggtacaggggttttgcgtcaagctataaggaattttttgaga
cggcatccgcatgtaaaatcattcagagatggaacatatggtgaaggtgaacagggtgtt
acggtggttgagctgaaagactaa
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