Caldicellulosiruptor hydrothermalis: Calhy_1211
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Entry
Calhy_1211 CDS
T01346
Name
(GenBank) ABC transporter related protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Calhy_1211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chd02000
]
Calhy_1211
Transporters [BR:
chd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Calhy_1211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
Zeta_toxin
AAA_21
AAA_30
SRP54
RsgA_GTPase
AAA_16
nSTAND3
AAA_15
TsaE
DEAD
AAA_23
AAA_29
MMR_HSR1
ATP-synt_ab
AAA_25
AAA_14
AAA_5
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADQ06931
UniProt:
E4Q912
LinkDB
All DBs
Position
complement(1235812..1237605)
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AA seq
597 aa
AA seq
DB search
MNTSTKRLRIEEDEPITKPFNWSQFVRLLRYIKPYKRYFIYSLLLMILATFYNLAGPYLI
RLVIDIDIPHRNIHALFYKAVFYIVLTLLYVISLRVRTIFMTKLGNSVVSDIRMHLFTHL
QKLSLNFFDSRPAGKIMVRVMNDVDSLSELLSNSILNVLVDTLSLWATIVIMLSIDIKLS
IVALAVLPLLISIIMILKNSIRTRWQDVRKKSSTLNAYIHESIQGMKITQAFVREEKNAE
IFKMLNTTFKNTWMKAIRVNNLFWPTIDFTGTLSSVLIFLFGIWMMRKGYTTLGTIIAFS
NYMGMFWQPINNISNFYNQLLVAMASTERIFEILDTQPDVQDAKDAYDLPPIRGEITFEN
VSFSYDEEKPVLKDVSFTIKAGETIALVGETGAGKTTIINLIARFYDPQKGKILIDGHDI
KNVTLNSLRKQMGIMLQDTFIFSGTIADNIRYAKPQATMDEVIKAAKIVNAHEFIMKMEN
GYDTEVNERGSRLSIGQRQLIAFARALLADPKILILDEATSAVDTQTEVLIQQAIEKLTS
GRTSIIIAHRLSTIRNADRIFVIHDGQIVEEGNHEQLIEKKGYYYNLYTSQFKYFEK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacttctacaaaaagactcagaattgaagaagatgaaccaataacaaagcctttt
aattggtcacagtttgtgagacttttgagatatataaagccatataaaaggtactttata
tactctcttcttctaatgatacttgctacattctacaaccttgccggaccgtatttgata
agattggttattgatattgatattccccacagaaatatccatgctcttttttataaggca
gttttctatattgtacttaccttattgtacgtgataagtcttcgcgtaagaacaatcttt
atgacaaaactcggcaacagtgtggtctcagatattcgaatgcatctttttactcatctt
cagaaactatctctcaacttttttgacagtcgacctgcaggcaagataatggtaagagta
atgaatgacgtggattctttatcagagcttttgtctaacagtattttaaatgtgcttgtt
gacactttaagcctttgggctaccatagtaataatgctttcaatagatataaaactttcc
attgtcgcacttgcagtgcttcctcttttaatctcaataatcatgatattaaaaaattcg
ataagaacaagatggcaagatgtcaggaaaaaatcctctaccttgaatgcttacatccat
gaaagcattcaaggaatgaaaataactcaggcttttgttagagaagaaaaaaatgctgaa
atctttaagatgcttaacactacattcaaaaatacatggatgaaagcaatcagagtaaat
aacctattttggccaacaatagatttcaccgggaccctttcgagtgttcttatatttctt
tttggtatctggatgatgagaaaagggtacacaacacttggcacaattatagcattttct
aattatatgggaatgttctggcaacctattaacaatatatctaacttttataaccagctg
cttgttgctatggcatcaacagagcgcatattcgaaattcttgatactcaaccggatgtt
caagatgccaaagatgcatatgacttaccaccaattagaggtgaaataacatttgaaaat
gtttctttttcatacgacgaggaaaaacctgttttaaaagatgtttcattcaccattaaa
gctggtgagacaattgcgcttgtaggcgaaacaggtgcaggaaaaaccacaataataaat
ctcattgcaaggttttatgatcctcaaaaaggaaaaatcctgattgacggacatgacatc
aaaaacgtaactttaaactcactaagaaagcaaatgggtataatgttacaagacactttc
atattttctggcacaattgcagacaacattcgatacgcaaaaccgcaagctacaatggat
gaagtaataaaggctgcaaagattgttaatgcgcacgagtttattatgaaaatggaaaac
ggatatgatacggaggtcaacgaaagaggaagtcgcctctctatcggccaaagacagctc
atcgcatttgccagagcacttttagctgacccaaaaatactgatattagatgaagcaacc
tcggcagtagacactcaaacagaggtcctaatccaacaggctatagaaaagctaacatcg
ggcaggacctcaattattatagctcacagactgtccacaatcagaaatgcagacaggata
tttgtcatccacgatggacaaattgttgaagaaggcaatcatgaacagcttattgagaag
aaaggctattactataatctctatacctcacagtttaaatattttgaaaaatag
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