Caldicellulosiruptor hydrothermalis: Calhy_1235
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Entry
Calhy_1235 CDS
T01346
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chd03016
]
Calhy_1235
Enzymes [BR:
chd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Calhy_1235
Transfer RNA biogenesis [BR:
chd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Calhy_1235
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ADQ06955
UniProt:
E4Q9I4
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All DBs
Position
1266032..1267447
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AA seq
471 aa
AA seq
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MESKNIYYIDFGTQARFVEEIEKMNTEYYLTNGKNKKYHIVTYGCQMNVHDSEKLAGMLN
AMGYIETENIQEADLIIFNTCSVREHAESRVYGNIGPLKRLKDKKPDLIIGVCGCMPQQV
EVAQKLAKLFPFLDIIFGTKSLHKFPQLLYTAIMEKKTVIDVSEDEDVVVEGIPTARKQG
VSAFVNIIYGCNNFCSYCIVPYVRGRERSRRPEEIVYEIEQLAQNGVKEVTLLGQNVNSY
GKDLGDGITFPKLLEKVNEIKGIERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQS
GSTRILKAMNRHYTKEDYLRLIEKLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKV
EFDSAYTFIYSKRRGTPAEKMPNQVPDDIKRQRFQRLVKLVEDIALKKNRQMLGKTYEVL
IDGQSKRNNLLVGRTRTNKVVNVKCPEEYMFKFVNVKILEAAEHWLYGEVI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttggaaagcaaaaacatttattatatagattttggaacacaggcacggtttgttgaagag
attgaaaaaatgaatacagagtattaccttacaaatggcaaaaataagaaatatcatatt
gtgacatatggttgtcagatgaatgttcatgattctgaaaaattagctggaatgctaaat
gcaatgggatacattgagactgaaaacatccaagaagctgacttgataatatttaacaca
tgcagcgtgcgagaacatgcagagtcaagggtatatggaaatattggacctttaaagagg
ctaaaggacaaaaagcctgatttgataattggtgtgtgcggatgtatgccgcagcaggtt
gaagttgcacaaaaacttgcaaaattgtttccattccttgatataatatttggcacgaaa
agtcttcacaaatttccgcaactactttatactgccattatggagaaaaaaactgtcatt
gacgtttcggaagatgaggatgtggttgttgaaggaattccaactgcaagaaagcaagga
gttagcgcgtttgtcaatataatttatggatgcaacaatttttgttcttattgcatagtt
ccatatgtcagagggagagaaagaagcaggcgacctgaagagattgtatatgaaattgag
caacttgctcaaaatggagtaaaggaagttactcttctggggcaaaatgttaattcatat
ggaaaagacttaggagatggtatcactttcccaaaactgcttgaaaaggtaaatgaaata
aaaggaattgaaagaattagatttgtaacttctcatccaaaggatttatcagacgaactt
attgtggctatgagggatttagaaaaggtctgtgaacatatacatctaccagttcagtca
gggtcaacaaggatattgaaggctatgaacagacactatacaaaagaagactatcttaga
cttattgaaaagcttaaaacaaatattcctgatatagcaattacaactgacattattgta
ggttttcctggagagacagatgaagattttgaagatactcttgatgtatgcaggaaggta
gagtttgactctgcatatacatttatttattcgaaaagaagagggacacctgctgaaaaa
atgcccaatcaggttccagatgatataaaacgccaaagatttcaacgtcttgtaaagctt
gttgaagatatagctttaaaaaagaacaggcagatgcttggcaaaacgtatgaagttctt
attgacggtcagtctaaaagaaataatttgcttgttggaagaacaagaacaaacaaggtt
gtcaatgtgaagtgtcctgaggagtatatgtttaagtttgtcaatgtaaagattttggaa
gctgctgagcattggctgtacggcgaggtgatttag
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