Caldicellulosiruptor hydrothermalis: Calhy_1236
Help
Entry
Calhy_1236 CDS
T01346
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Calhy_1236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_1236
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Calhy_1236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_14
nSTAND3
nSTAND_NTPase5
CbiK
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
ADQ06956
UniProt:
E4Q9I5
LinkDB
All DBs
Position
1267451..1270042
Genome browser
AA seq
863 aa
AA seq
DB search
MQELTPMMQQYMEIKQKVRDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKA
PMCGVPYHSATSYIAKLIEKGYKVAICEQVEDPKLAKGIVKREITRIITPGTFIDENLST
ANNFICCISKDRSEFALTFVDVSTGEMYSCLLEEDLQKLLNEIGKYSPSEILISHIEDEL
YEFLKKNCASFVQMIEFVDLQKCYEVIENQINVGKIDERLILSVGNLLKYLTETQKISFD
YIRRFEFYRVQNYLQIDINTKRNLELTESIIQRSKKNSLLGILDQTKTSMGSRLLKKWIE
RPLIDVIEINRRLDSVEELKSNYSTLVQVEELLSRMYDIERLSSKFAYKNVNAKDLLSLK
RSIEVLPALKKLLSSFSAQLLKEIYEGLDTLEDIYALVDNSINEDAPVTLKEGGIIKDGF
NEEVDRLRNISKNSKELLVQYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRY
IRKQTLANAERYITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASYI
AILDVLCSFARIAIDNEYVRPNVYLGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAEN
RVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQ
STFMVEMSEVANILKNATPKSLIVFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLF
ATHYHELTELEERIPGVKNYRVDVKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEV
LKRAEEILKQLEEADINRKNIRKLRKEIKKEFTEQMDFFSYKKEEIIDKIEKLDILNITP
IQALNILSELKHEIIKAKERQLI
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagctaactcctatgatgcagcagtatatggagataaaacagaaggtgagagat
tgtattttattttttaggcttggtgatttttatgagatgttttttgaagatgctattgtg
gcatccaaagagcttgagatagccttaaccagcagagattgtggaaacaatgaaaaagct
cctatgtgtggtgtgccgtaccattctgcgaccagctacattgcaaagcttatcgaaaaa
ggttacaaggttgcgatctgcgaacaggtggaagatccaaagcttgcaaagggaattgta
aaaagggaaattacaagaataataactccaggcacatttattgacgagaatctttcaaca
gctaataattttatctgttgtatatcaaaagacaggtctgaatttgcattgacatttgta
gatgtttcaactggtgagatgtactcttgccttcttgaagaagaccttcagaaactgtta
aatgaaattggcaaatacagtcccagtgaaattttaatttcacatatagaagatgagctt
tatgaatttttgaagaaaaactgcgcttcttttgtgcagatgatagagtttgtggattta
caaaagtgctatgaggtcatagaaaatcagataaatgtgggtaaaatagatgaaaggctg
attttaagcgtaggaaatctgctgaagtacttaacagagacccaaaaaatttcctttgat
tatataagaagatttgaattttacagagtccaaaattatcttcaaattgacataaataca
aagcgaaatttggaactcacagaaagtattattcagcgctctaaaaagaatagccttctt
ggtattttggaccaaacaaagacctcaatgggttcaagactattgaaaaaatggattgag
agacctcttattgacgttattgagattaatagaaggcttgatagtgttgaggagctcaaa
tcaaactattccactttagtgcaggtagaagagcttttgagtagaatgtatgatatagaa
agactttcttcaaagtttgcatataagaatgtgaatgccaaagatttgctgagtctaaaa
aggtcgattgaagtgttgccagctttaaaaaaacttctttcttcattttctgcacagcta
ttaaaagagatttatgagggtcttgatacattagaagatatatatgcgcttgttgacaat
tccataaatgaagatgcacctgtaacattaaaagagggtggaataattaaggatggtttt
aacgaagaagtggatagattaagaaatatatcaaaaaatagtaaggagcttttagtacag
tacgaagaaaaagagaggaacctcacaggtataaaaaatctcagaattggttataataag
gtttttggatactatattgaggtgaccaagtcaaactactctcttgttccggacaggtac
attcgaaaacaaactcttgcaaatgcagaaaggtatataacagaggagctaaaaaaattg
gaagatgaaatattgggcgctgatcagaaactcatcgaacttgaataccagcttttttgc
gaaataagggatagaattgaggctcagattgaaaggattcaaaaaacagcaagctatatt
gccatcttggatgttctgtgttcatttgcccgtattgcaattgacaatgaatatgtcagg
ccaaatgtttacttaggggatagaatatacattaaaaacggtagacacccagttgttgaa
aagatgataggcagaggcaatttcattccaaatgacactgaacttgatcaggcagaaaac
agggttttgattataacaggtccaaatatggctggtaagtctacatacatgagacaggta
gccttaattgttataatggcacagatggggtgttttgtacccgctgatgaggcacacatt
ggtatagtggataaaatcttttcaaggataggtgcatctgatgatatttcatctgggcag
agtaccttcatggtggagatgtccgaggtagcaaatatattgaaaaatgcaacgccaaaa
agccttatagtttttgatgaggttgggagaggaacaagcacgtatgacggactttccata
gcatgggcggttttagagtatgttgctgataaatctaaaattggtgcaaaaacccttttt
gcaactcattaccatgagctaacagagcttgaagagaggattccaggtgtaaaaaactac
agggttgatgtcaaggaggagggcaaaaacattatatttttaaggaaaattgttagaggt
ggatgtgactcaagttatgggattcatgttgcacggcttgctggaattccagaagaggta
ttaaaaagggctgaggaaattctaaaacagcttgaagaagctgatataaatagaaaaaat
atcagaaagcttaggaaagaaattaaaaaggaatttactgagcagatggattttttttcg
tataaaaaagaggagataatagacaaaatcgaaaagcttgatattttaaatataactcct
atccaggctttaaatatcctaagtgagctcaaacatgaaataattaaagccaaagagagg
caattgatatga
DBGET
integrated database retrieval system
