Caldicellulosiruptor hydrothermalis: Calhy_1441
Help
Entry
Calhy_1441 CDS
T01346
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03420
Nucleotide excision repair
chd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Calhy_1441
03430 Mismatch repair
Calhy_1441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_1441
Enzymes [BR:
chd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calhy_1441
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Calhy_1441
MMR (mismatch excision repair)
Other MMR factors
Calhy_1441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_14
DEAD
LPD3
Motif
Other DBs
NCBI-ProteinID:
ADQ07158
UniProt:
E4QAY0
LinkDB
All DBs
Position
complement(1470626..1472770)
Genome browser
AA seq
714 aa
AA seq
DB search
MEWLKELNEQQKEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLANPGNILAITFT
NKAADEMKERIKRLVSTQSFSEMWVSTFHAACARILRMEAHNIGFSNNFVIFDTQDRQQL
LKECFDRLNIDSERLDIRHVSRQISNFKNQLIGPSEVYRYGDVDGRVVEVYKLYNKLLKE
YNAFDFDDLLYYTVVLFETNPDILEKYQNKFKYILVDEYQDTNHAQFYFIYLLSQKHRNV
CVVGDDDQSIYSFRGANIKNILEFEKVFSDAKVIKLEKNYRSTKTILSAANEVIKHNYYR
KSKRLWTDNLEGEKIFLYSAFDEVNEAEFVASSVKNLIESGLSPSEIGVLYRTNAQSVNF
ENALSAYSVPYKVVGALRFYERKEIKDIIAYLRLITNPHDDLSLFRIINVPRRGIGNSTL
EKIKVLSKEYGVSAYTVLLERAKIDFDKKTYEKLNSFISLIEDLKAEAENLSVSQTIKLV
LDKTGYLESLLSSKSEEEFQRAKNIEQLISAAAIFEEENEEPTVQNFLNSITLSSEEEDT
QKEEKVSLMTVHAAKGLEFEVVFLTGLEEGLFPLVRAEEPVEAEKELEEERRLCYVAITR
AKKLLVLTYANNRRVFGRFSSRQKSCFIEEIPQKYIQVVYSPITKTHQTFSAKINQTEDA
SISNLQVGNKVQHGKFGVGKVIWLSDDMKEVVVDFEKIGQKRLLLSYANLKRIG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaatggttaaaagaactaaatgagcagcaaaaagaggcggttctttcaacagaaggg
ccgcttttagtattggctggtgcaggttcagggaaaactcgtgtcataacatatagaata
gcatatatattgaatatggggttagcaaatccgggcaatatccttgcaattacttttaca
aacaaagctgctgatgagatgaaagaaaggataaaaaggcttgttagcacccagtcattt
tcagagatgtgggtgtctacttttcatgctgcgtgtgcaaggattttgagaatggaagct
cataatataggattttcaaacaactttgtaatatttgatacacaggatagacagcagctt
ttaaaggagtgctttgatcggctgaatatcgactcagagaggcttgatatcagacatgta
tcaaggcagattagcaatttcaaaaatcagctaattggaccctctgaggtatacagatat
ggtgatgttgatggtcgtgttgttgaggtgtataaactttacaataaacttttaaaagaa
tacaatgcgtttgactttgatgaccttctgtattacactgtagttctttttgaaacaaac
cctgacattctggaaaagtatcagaataagtttaaatacatcttggtagatgagtatcag
gacacaaatcatgctcagttttattttatttatttactttcacagaaacacagaaatgtc
tgtgttgtcggtgatgacgaccagagtatatacagtttcagaggagcaaatataaaaaat
attttggaatttgaaaaggtttttagcgatgccaaggtaataaaattagaaaaaaactat
aggtctacaaagacaatactctcagctgcaaatgaggttataaaacacaactattataga
aaatctaaaaggttgtggacagacaaccttgagggtgaaaagatttttctatactcagct
tttgatgaagtaaatgaagcagagtttgttgcatcgagtgtgaaaaatcttattgaaagc
ggactttcaccatcagaaataggagtgctctaccgaacaaatgctcagtctgtaaacttt
gagaatgcactttcggcttattctgtaccatataaagttgtaggtgctttgcgattttat
gaaagaaaagaaataaaagatattattgcttatttgagactcattacaaatccgcatgac
gatttgagtctatttaggattattaatgttcccagaagaggaattgggaacagtacttta
gagaaaataaaagttttgagtaaagagtatggcgtttcagcgtatacagttttacttgag
cgagcaaagattgattttgacaagaagacatatgaaaagctgaatagctttatatctctg
atagaagatttaaaagctgaggcagaaaatttgtctgtaagtcagaccattaaacttgtg
cttgacaagacggggtatttagaaagtttgctcagtagcaaaagtgaagaggagtttcag
agagctaagaatattgagcagcttataagcgctgcagctatttttgaagaagaaaatgag
gagcctactgtgcaaaactttttaaattctattactttgagctctgaagaggaagatact
caaaaagaagaaaaagtttcgcttatgacagttcatgctgcaaaaggattggaatttgaa
gttgtcttccttacagggttggaagaaggactgtttccgcttgttagggcagaagaacct
gttgaggctgaaaaggaacttgaagaagaaagaagactgtgttatgtagcaattacaaga
gcaaaaaagcttcttgttctgacatatgctaacaatcgaagagtatttggcaggttttct
tcacgacaaaagtcatgtttcattgaggagattcctcaaaaatacattcaagttgtttat
agtcctattactaaaactcaccaaacattttctgccaagattaatcaaactgaagatgct
tctattagcaatctgcaagttggaaacaaggtccagcatggaaagtttggagttggaaaa
gttatctggctttcagatgatatgaaagaggtagtagtagattttgaaaagattggtcag
aaaaggctacttctgtcctatgcaaatcttaaaaggattggttga
DBGET
integrated database retrieval system
