Caldicellulosiruptor hydrothermalis: Calhy_1505
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Entry
Calhy_1505 CDS
T01346
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chd03009
]
Calhy_1505
Enzymes [BR:
chd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Calhy_1505
Ribosome biogenesis [BR:
chd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Calhy_1505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Big_14
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADQ07222
UniProt:
E4QBC9
LinkDB
All DBs
Position
complement(1535655..1536356)
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AA seq
233 aa
AA seq
DB search
MRLDKFLTHCGFGSRSQVKKLIRGGIVTVNGKRIVEVDFKINPEEDVVEVDGRIVKFSRR
IYIMMNKPKGYVCSNDDPASLTVFSLISDNLKYRDLHTVGRLDKDAEGLLIITDDGEYTH
RVISPRKRIEKEYLVRLEKEVDEERLKEFENGIILDDGYKTLPAKYTIIDSTTVKLCIYE
GKYHQVKRMFEAIGNKVVDLKRLRIGGLNLDESLKPGEYRVMKEEEAYLVFGK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagacttgacaagtttctgactcactgtggatttggttcacgaagtcaggttaaaaaa
ctaataagaggaggaattgtgactgtaaatgggaaacgaatagtagaagttgattttaag
attaatcccgaagaagatgtagtagaagtcgatggcaggattgtaaagttcagtagacgg
atttatatcatgatgaacaaaccgaaaggttatgtgtgctcaaatgacgacccggcatca
cttacagtgttctcacttatttctgataatttaaagtatcgagatttgcatacagttgga
aggcttgacaaagatgcagaaggtcttttgataattacagatgatggtgaatatacgcac
agagttatctcacccagaaaaagaattgaaaaagagtatttagtaaggcttgaaaaagag
gtggatgaggaaagattaaaagagtttgaaaatggtattattttagatgatggttataag
acacttcctgcaaaatatactattattgatagtaccacagtcaaattgtgtatatatgaa
ggtaaatatcatcaggttaaaaggatgttcgaagcaattggaaataaggtggtggactta
aaacgcctgagaataggaggtcttaatttagacgaaagtttaaaaccgggtgaatacagg
gtgatgaaagaagaagaggcttatttggtgtttggtaagtaa
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