Caldicellulosiruptor hydrothermalis: Calhy_1592
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Entry
Calhy_1592 CDS
T01346
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_1592
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calhy_1592
Archaeal homologous recombinant proteins
Calhy_1592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
GAS
AAA_21
AAA_27
AAA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADQ07308
UniProt:
E4QBU2
LinkDB
All DBs
Position
complement(1615763..1618336)
Genome browser
AA seq
857 aa
AA seq
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MRPLFLRIENFKSYQETQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG
KRGKVAETEYINSHKDYMQVEFEFELNKTIYKVVRRLDRRGKKYLSLFVRKADSLIPINE
ATYTQTQIKLQNILGIDFNVFLHSAYLSQKRTEDFLLSSPENRREILAKILNLSIYDRIN
ELAKEKRKEIKVLLDIKNKEIEEENKILSEEESIKSLMADLEKKRTAIEAELNGLRNRLN
ALISQRSEIEQKLHLLSQKKNEMTEHQRKAEEIRYKIETARKELLKIEEKLNEEDKITAM
VKEYEMIKEKVEIKRKDYEMYIELKNKMVLYERDIKNKLDQKKIFEKSIEESNLQLNKET
SEISKYEEEMKKVEVEISKVENELEKVKQYKQEQEKKREEIVKHEKLLEVVENKLKELAS
SYRLIEANQGRCPVCLRQINGQEEKEHIKNEIAAQGKEFKQRRDSLTKKLEILRKEFSEL
EEKIKLEELLRAREKKLHGMFENLKAKVDQKTQNIVNLQNSIAQITQSVKLCEDEVERLK
EKMASIKREISVLNFDENYYTQLLQREKELEIYQSLFNELTINKVKAENLKKEILEYQEQ
EKEFFEKLGNLRQEIANLSSVAHDMMLEKVKSDILSCENKIKNLQENLNSVLKELGIIEQ
KLNQIGEAKKKLSSLENEIEEMKKKIEIYDIIIDITGPDGIKNEIIANTLPQIKDEANGL
LKILTNGAFSIDFKTQRETASGKTIETLQIEISDANGTRNYELFSGGELFRINFAIRIAL
SKVLLKRAGASIRMLILDEGFGSQDEEGKDHIVECLNRIKDQFDTILVITHIEDLMDAFD
QRIVVKKDMEGSKIFVV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
ttgagacctctttttttgaggattgaaaatttcaaatcatatcaagagactcaaaacgag
attgattttagtaatataaaagttgcctgtatcatagggaaaaatggcaatgggaaatct
tctattgctgaggcaattgcctgggcgctttttggtgagtttgaaagacttcaaacaggc
aagcgtggaaaagttgcagaaacagagtatataaactcacataaggattatatgcaggtt
gaatttgaatttgaattgaataagaccatatataaagttgtgagaagacttgatagaaga
gggaaaaagtacctttcgctttttgttagaaaagcagacagtctcatacctatcaatgaa
gcaacttacacccaaacccaaataaagcttcagaatattttagggatagattttaatgtc
tttttgcattctgcctatctttctcaaaaacgaacagaagattttttactttcttcgcca
gaaaacaggcgagaaattcttgcaaagatactgaacctgagtatatatgacaggataaat
gaacttgcaaaagaaaaacgaaaagagataaaagttttgctggatataaagaacaaagaa
atagaggaggaaaataagattttgtcagaagaagagtcaataaaatctttgatggctgat
ttggaaaagaagagaaccgcaatagaagctgaattaaacggtttgagaaatagactaaat
gcccttatttcgcagaggtctgaaatagaacaaaaacttcatttattgagtcagaaaaag
aatgaaatgacagaacatcagagaaaagctgaggagataaggtataagattgaaactgcc
agaaaagagcttttaaaaattgaggaaaagttaaatgaagaagataagataactgcaatg
gttaaagagtatgagatgataaaagaaaaggttgagattaagagaaaggattatgaaatg
tatattgagcttaaaaacaagatggttttgtatgaaagggatataaaaaacaaactggat
cagaaaaagatatttgaaaagagtattgaagagagtaatttacaactgaataaagaaact
tctgagatttcaaagtatgaggaagagatgaaaaaagtggaggtagaaatttcgaaggtc
gaaaatgagctggaaaaagtaaagcagtataaacaggaacaagagaagaaaagagaggaa
attgtaaaacatgaaaaattgttagaggtagtggaaaacaaattaaaagagcttgcttca
agttacagacttatagaggcaaatcagggaaggtgcccagtatgcttacgccagattaat
ggtcaagaagaaaaagaacatataaaaaatgaaattgcggcccaaggaaaagaatttaaa
caaagaagagatagtttgaccaaaaaacttgaaattctaagaaaggagttttctgagctt
gaagagaaaataaaacttgaagaacttcttcgggcaagagaaaaaaagcttcacgggatg
tttgaaaacctgaaagccaaggtggatcagaaaacacaaaacattgttaatctacaaaat
tcaatagcccagataacccaaagtgtaaagctttgtgaagatgaagtagagagactgaaa
gaaaagatggcaagcataaaaagagagatttctgttttaaattttgatgagaattactac
acccagcttttacaaagagaaaaagaacttgaaatatatcaaagcctttttaatgagctt
actataaacaaggtcaaagctgagaatttaaaaaaggagatacttgagtatcaagaacaa
gaaaaagagttttttgaaaagcttgggaatttgaggcaggagatagcaaatttatcttct
gttgcacacgatatgatgcttgaaaaagtaaagtcagatattctgagctgtgaaaataag
ataaaaaatcttcaagaaaatctcaattctgttttgaaagaattgggaataattgagcag
aaactaaatcaaattggagaggctaaaaagaagctctcaagccttgaaaatgaaatagag
gagatgaaaaaaaagattgaaatatatgacataataattgatatcaccggaccagatgga
ataaagaacgaaataattgcaaatactttgccacagataaaagatgaagcaaatggactt
ttaaaaattctgacaaacggcgcattttcaatagattttaaaacccaaagagaaacggca
tctggaaaaacaatagaaactctccagatagaaatttctgatgcaaacggtacaagaaac
tatgagcttttttcaggaggagagcttttcaggataaattttgctatcagaattgctctt
tcaaaggtacttctcaaaagagcaggtgcttctataaggatgctaattttagacgaaggt
tttggatctcaagatgaagaaggaaaagaccacattgttgaatgtttgaatagaatcaaa
gaccagtttgacactatacttgttataacccacattgaggatttaatggatgcatttgac
cagcgaattgttgttaaaaaagatatggaagggtctaaaatttttgttgtataa
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