Caldicellulosiruptor hydrothermalis: Calhy_1682
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Entry
Calhy_1682 CDS
T01346
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chd03016
]
Calhy_1682
Enzymes [BR:
chd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Calhy_1682
Transfer RNA biogenesis [BR:
chd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Calhy_1682
Prokaryotic type
Calhy_1682
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADQ07397
UniProt:
E4QCA5
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All DBs
Position
complement(1714190..1715062)
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AA seq
290 aa
AA seq
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MNGVLLVDKPVGITSHDVVEFVRKVFNVKAGHAGTLDPFATGLLVILLGEATKLSSFFTS
QKKTYIATMQFGIRTDTLDITGKIKEKNNLIVEEKEIEECFKNLKGEIELDVPIFSAKKL
RGKKLYEYARKGINIEIPKVKSIIYNIEIINFSYPYLEFKVQCSHGTYIRSLAEKIAESL
STVGLLSELRRIRSGFFDLKDAVLLSDIRTESIIPVCRLFKNEIKVGRKTYKKILNGNPL
VNQDIEDIIDIDTVFADFYKIWVDKVVFIYKREKDVFKYILKVETADECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttgcttgttgacaaaccagtaggtattacctcacatgatgttgttgaa
tttgtcaggaaagtcttcaatgtgaaagctgggcatgcaggaacactcgacccgtttgca
actggccttttggtcattttgctgggggaggctacaaagctttcttctttctttacaagc
caaaaaaaaacatatatagcaacaatgcagtttggtataaggacagatacacttgatata
actggtaaaatcaaagaaaaaaataatttgattgttgaagaaaaagagatagaagaatgt
tttaaaaatttaaaaggagaaattgagcttgatgttccaattttttctgcaaagaagctg
aggggtaaaaaactctatgagtatgcacgaaaaggaataaatattgaaattccaaaggtg
aagagtatcatatataatatagagataatcaacttttcatatccgtatcttgaatttaaa
gttcagtgtagccatggaacgtatataagaagtttagctgaaaagattgcagaaagtctt
tctactgtaggtttgctttctgagctaagaaggataagaagtggattttttgatttaaaa
gatgcagtgttacttagtgatattaggacagaaagtataattcctgtgtgcagactattt
aaaaatgagataaaagtaggcagaaaaacatataagaagattttaaatgggaatccactt
gtaaaccaggatatagaagatattatagatattgacactgtatttgcagacttttataaa
atttgggttgataaggttgtctttatatacaaaagagaaaaggatgtattcaaatatatt
ttaaaggtggaaactgcagatgaatgtttatga
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