Caldicellulosiruptor hydrothermalis: Calhy_1698
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Entry
Calhy_1698 CDS
T01346
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Calhy_1698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_1698
Enzymes [BR:
chd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calhy_1698
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calhy_1698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
ATPase_2
Cas3-like_C_2
PIF1
nSTAND_NTPase5
AAA_19
AAA_16
DUF3638
IstB_IS21
Glycos_transf_2
Bac_DnaA
AAA_22
DUF815
UvrD-helicase
TK
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADQ07413
UniProt:
E4QCJ6
LinkDB
All DBs
Position
complement(1729772..1731946)
Genome browser
AA seq
724 aa
AA seq
DB search
MIAQVCINYQDANVDKVFDYLVPTHLENSIEIGKRVYVSFGVSNRIVEGLVVGIKQTTDI
EENKLKSVLAVIDKFSIVSKEQIELAFSMKNYYALNLGEALSLVIPPFVSSKQIYNICAK
KHEENRNLDDDLKKLYESILKKPVSVNSKLVKENKEKIMKLFLEGLLEFDLKNFDTRENA
EKNLPLVEPNYNLTEEQHKALNSIISAFDEGGYNNILLFGVTGSGKTEVYIRAIQYAIEK
GKSVIFMVPEISLTPQMIENVQSRIGNKVLVYHSKMKSLDRLNSWLAARNKEAVVVIGPR
SAVFAPVKNLGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINNIPIILGSATPSIEHY
FYAQKGRYFLCTLKNRINKNLPEVLIVDMKKEILEGNKSIFSRLLLSEIENNLKKGEQVL
LFLNRRGYSPIVICRECGYVYMCKNCSISLTYHKEGYLRCHYCGYKEEYRGVCAKCNSRY
VRQYGSGTQKIEEEIKAYFKDARVLRMDSDTTSRKDATEQIVKKFREKEADILVGTQMIA
KGLHFPDLTLVGVIDADILLNMPDFRSRERTFQLLTQVAGRSGREKPGKVIIQTFNPEDY
SIVFASKHDYESFYAQEMKLRKMMEYPPYSYVVNFVTVAREQNMAKRGIEHVYALLREYE
MENDMKIYGPSENPIFKIENQYRYHILVKFKRAGQMISIANLIKERYNYSNASLIIDVNP
LDTL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatagctcaggtttgtatcaactaccaggacgccaatgttgataaggtgtttgattat
ttggtaccaacacatcttgaaaatagcattgagatagggaaaagagtgtatgtaagcttt
ggagtttcaaatagaattgtggaagggcttgttgttgggataaagcaaactactgatata
gaggaaaataagttaaagagcgtgcttgctgtaattgataagttttcaattgtttcaaag
gaacagatagaacttgctttttcaatgaaaaattactatgcgttgaatttgggtgaggct
ttgtcgcttgttatacctccttttgtgagcagcaaacagatatataatatctgtgcaaaa
aagcatgaagaaaataggaacttggatgatgatttaaaaaagttgtatgaaagtattttg
aaaaaaccggtgagcgtaaattcaaagcttgtgaaagagaacaaagaaaaaataatgaag
ctctttttggaagggcttttggagtttgatttaaagaattttgatacaagagaaaatgct
gagaaaaatctgccgctggtagaacctaattataatttaactgaagaacagcacaaagcc
ctaaatagtataatctctgcttttgatgaaggaggatacaataatattcttttatttgga
gtcacagggagtgggaaaacagaggtttatataagagcgatacaatatgcaattgaaaaa
ggcaaaagtgtaattttcatggtcccagaaatctcactcacaccacagatgatagaaaat
gttcaaagtagaataggcaacaaggttttagtatatcacagcaaaatgaaaagtctagac
aggctaaatagttggcttgctgccagaaacaaagaggcggttgtggtgattggtccgcga
tcagcagtttttgcccctgtcaagaaccttggtcttataattgtcgatgaagagcatgaa
ccaagctataaatctgaaaaatcgccgcggataaatgctgttgaggttgcccagatgagg
gctaaaataaataatatacccattatacttggctctgcaactccatctattgagcattat
ttttatgcacaaaaaggaagatattttctttgtacgttgaaaaatagaataaataagaat
ctgccagaagttttgattgttgatatgaaaaaagaaatcttagaaggtaacaagtccatt
tttagcaggcttttacttagtgaaatagagaacaacttgaaaaaaggggagcaggttctc
ctttttttaaacaggagaggttattctccaattgttatatgccgtgagtgcggttatgtt
tatatgtgcaaaaattgcagtatttcacttacataccacaaagaagggtatttgagatgt
cactattgcgggtataaagaggaatatagaggtgtgtgtgcaaaatgtaacagcaggtat
gtcagacaatatggtagtggcacccagaagatagaggaagagataaaagcgtactttaaa
gatgcgagggttttgcgtatggacagtgatacaacttcaagaaaagatgcgacagaacag
attgtgaaaaagttcagggaaaaagaggcagatattcttgttggtacacagatgattgca
aaaggtttgcactttcctgacttgaccttggtgggtgtgatagatgcagatattcttttg
aacatgccagatttcaggagtagagaaagaacctttcaactgcttacacaggttgcagga
aggtctggcagggaaaagccaggaaaagttataattcagacttttaaccctgaagattac
agcattgtgtttgcttcaaagcacgactatgaaagcttttatgcccaggaaatgaaactg
agaaaaatgatggaatatccaccgtattcttatgtagtcaactttgttacagtagcaagg
gaacagaatatggcaaagagaggaatagagcatgtatatgctttgctcagggagtatgaa
atggaaaatgacatgaagatttatggtccaagtgaaaatcctatctttaaaatagaaaac
cagtacaggtatcacatattggtaaagttcaaaagagctgggcagatgattagtatagca
aatctaatcaaagaaagatataattatagtaacgcgtcgcttatcatcgacgtaaatcct
ttggatacactttaa
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