Caldicellulosiruptor hydrothermalis: Calhy_1747
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Entry
Calhy_1747 CDS
T01346
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chd03009
]
Calhy_1747
Enzymes [BR:
chd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Calhy_1747
Ribosome biogenesis [BR:
chd03009
]
Prokaryotic type
ribosomal protein modification factors
Calhy_1747
BRITE hierarchy
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Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
ADQ07462
UniProt:
E4QCP5
LinkDB
All DBs
Position
complement(1772845..1774167)
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AA seq
440 aa
AA seq
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MIKVGFVSLGCNKNLVDSEIMMGACVKAGFEITSHAEDADVIVVNTCGFINDAKQESIDT
ILDMAEYKNKKCKFLIVTGCLTQRYKDEILEQMPEVDAILGVKEMLKLPEVIKDLYEGKQ
KIKVFDDTSSFVYYSSMPRVIATPSYYAYIKIAEGCNNRCSYCSIPLIRGKYTSRPIEDI
VKEAKELAEKGYQEIVLTAQDTTKYGTDLYGKKMLHALLEELEKIEKIKWIRFLYSYPED
VDENLIEVVKSSSKIVNYFDIPIQHINDRILKLMNRKTTKEGIKRLIEKIRRSFDEVIIR
TTVLVGFPTETDEEFEELCSFLKWAEFDRLGAFMYSQEEGTLASQLPQVDDEVKQRRYEK
VLNIQRKISKRQNKKRVGREYEVVIEAKDKNNFYIGRSQFEAPEVDGKVLVFSQKKLTAG
KFVKVKILDAFEYDLVGEII
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaggttggatttgtctcactggggtgcaacaaaaaccttgttgacagtgaaata
atgatgggcgcatgtgtcaaagcagggtttgagataacctcacatgcagaggatgctgat
gtaattgttgtaaacacatgtggttttataaacgatgcaaaacaggaatccatagatacc
atattagatatggctgaatataagaacaaaaaatgcaaatttttgatagtgacagggtgt
ttgacacagaggtataaagatgagatattagagcagatgccagaggttgatgcaatactt
ggcgtgaaagaaatgttaaaactgcctgaggtaataaaagatttgtatgaaggtaagcag
aagataaaagtgttcgatgatacttcttcgtttgtatactacagttcaatgccaagagtg
attgctacacccagttactatgcctacataaagatagcagaagggtgcaacaacagatgc
tcttattgctccataccacttattagaggcaagtatacaagcagacccattgaagatata
gtaaaggaagcaaaagaattagcagaaaaaggataccaggaaattgtcctcacagctcag
gatactacaaagtatggcacagacctatatggcaaaaagatgttacatgctttgcttgaa
gagcttgaaaagattgaaaaaatcaagtggataagatttttgtactcttaccctgaggat
gtggatgaaaatcttattgaggtggtaaaatcttcttctaaaatagttaactattttgac
attccaattcagcatataaatgatagaatattaaaactcatgaacagaaaaacaacaaaa
gaaggtataaaaaggctgatagagaagataagaagaagctttgatgaggttattataaga
acaacagttttggttgggttccctacagaaactgatgaggagtttgaagagctctgcagc
tttttaaagtgggctgagtttgacaggcttggtgcttttatgtattctcaagaggaaggg
acgcttgcttcgcagcttcctcaggttgacgatgaggtgaaacaaagaagatatgaaaag
gttttgaatattcagagaaaaatttctaaaaggcagaacaaaaagcgagttggcagagaa
tacgaagttgttatagaggcaaaagataaaaacaacttttatattggaaggagccagttt
gaagcaccagaagttgacggaaaagttttggtgttttctcaaaagaaactgacagctggc
aagtttgtcaaggtaaagatacttgatgcgtttgagtatgatttggtaggagagataatt
tga
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