Caldicellulosiruptor hydrothermalis: Calhy_1888
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Entry
Calhy_1888 CDS
T01346
Name
(GenBank) putative transcriptional regulator
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Calhy_1888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_1888
Enzymes [BR:
chd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calhy_1888
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Calhy_1888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLFN_AlbA_2
HATPase_c_4
BNYVV_p31
Motif
Other DBs
NCBI-ProteinID:
ADQ07598
UniProt:
E4QDI0
LinkDB
All DBs
Position
complement(1923016..1924140)
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AA seq
374 aa
AA seq
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MDKYKLKMLLESDEGPKLDFKQSLSLETDGEKKELVKDVIAIANSRGGRGYIIFGVEDKT
KRIVGIKDENISEEKIQQIISSRCDPPVSIKFEIVEYDGKKLGVLTIYKSSLRPHQMVQN
GVFYIRRGSTTDVARREEIASMFEESGSINFEMSIVRNANLNDLEPELISIFFRRSGISS
EWGNLILLESFGIVQRDRENNNLYPTLAGILVFGKYPERFLPSAYLTIEFFDQIQIICGN
IYSIIKKTINFFTQKYPQTDLWALFEAIGNALVHRDYYDLTRCTAVKISERSIEVANPGC
LLESNMIFSMGREIIPRRRNPWIYQKMIILDDNNLFLKAGKGISRIRKTYPNVKIININS
QNTFKIILPPIDKL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggataagtacaagcttaaaatgttacttgagtctgatgagggaccgaaacttgatttt
aaacagtctctttcacttgagacagatggtgaaaagaaagagcttgtaaaagacgtcatt
gccattgcaaattcaagaggtggaaggggctatatcatctttggggttgaagataagaca
aaaagaattgttggaatcaaagacgagaacatctctgaagaaaaaattcagcagataatc
tcaagcaggtgtgacccacctgtatcaattaaatttgagattgtagagtacgatggtaaa
aaacttggcgtgcttacaatatacaaaagcagtctaagacctcatcagatggtccaaaac
ggcgtgttttatataagacgggggtcaacaacagacgttgcaagaagagaagagatagca
tctatgtttgaagaaagcggcagcatcaattttgagatgtctattgtaagaaatgcaaat
ttaaatgatcttgaacctgagctaatctctatattttttagaagaagtggcatttcatca
gagtggggtaacttaattttgcttgaaagttttgggattgttcaaagagatagagaaaat
aataatctttatcctaccttagcaggtattcttgtgtttggaaaatatccggagagattt
ttgccgtcagcgtatttgacaattgaattttttgaccaaattcagattatttgtggtaac
atatatagtataatcaaaaagactataaatttttttactcagaagtatcctcagacggac
ctatgggctttgttcgaagcaattggaaatgcacttgttcacagggattattatgacctg
acaagatgcacggcagtcaagatttccgaaagaagcatagaagttgcaaatcctggatgt
cttcttgagagcaacatgatatttagtatggggagagaaattataccaaggcgtcgaaat
ccgtggatttatcaaaaaatgataattttagacgacaacaatctctttttgaaagccggc
aagggaatatcaaggataagaaaaacatatccaaacgttaagattataaatataaattcc
caaaatacatttaaaatcatattgccacctattgataaactgtaa
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