Caldicellulosiruptor hydrothermalis: Calhy_1916
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Entry
Calhy_1916 CDS
T01346
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd00550
Peptidoglycan biosynthesis
chd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Calhy_1916
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chd01011
]
Calhy_1916
Peptidoglycan biosynthesis and degradation proteins [BR:
chd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Calhy_1916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
ADQ07626
UniProt:
E4QDK8
LinkDB
All DBs
Position
complement(1952169..1954328)
Genome browser
AA seq
719 aa
AA seq
DB search
MKEASIKIKKRILFVMAIFFLSFVLLVGRLFYLQLIKGEELKKRAFSQWTRERLVAPKRG
SIVDRNGKILAMSITAETVVASLNQIKDKEWTAKVLSGILQMDYQKILNKLNTKGVSDIY
IARNIDKEKADKIRKYALPGIYLTGGTKRVYPNGNFLAQVLGFTGIDDQGLSGLELYYDK
YLRGKPGAISAQTDASGRAAPFSEEFFKKPIDGYDLMLTIDETIQHFAEKYAQKALYDNK
AKSVTIIVEKVKTGEILAMTSKPDFDPNKPFELIYKDKFPDFDKLSQAEKNKIVQSMWRN
RALTDTYEPGSTFKIVTAAAGLEEGVVNENSQFYCRGYVKVANAILKCWRYYNPHGSENF
VEGVQNSCNPVFIEVGQRLGKEKLYKYINLFGFGQKTGIDLPGEAKGIIQPLNRVGPVEL
ATISFGQGISATPIQVISMINAVANDGVWVQPHVVKAIYDKDKKLIKSFDTPRKRRVLDQ
DVARRLKTILQSVVSNGTGHNAYLLGYKVAGKTGTSQKYDKTSKKYIASFGGFAPADNPE
VSVLVIIDEPDPSLYYGGLIAAPVARDLLNDILRYLDIQPQYTAEELKQIEFYKEYIVPN
TIGMNIEDAKKEIYNNKFNAKVIGSGDKVIDQVPKAGFMLKEGSTIVLFTHAMSQTTVDV
PNVVGLSSQDAQKVLANSLLNIKVKGIKGKIIRQNPQPGTKVPIGSIVEVEIADKENAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaagcatctataaagataaaaaagagaatcctttttgtaatggcaatatttttt
ttaagctttgtgttgctggtgggacgccttttttatcttcaactaataaaaggcgaagaa
ctcaaaaaaagagctttttcccaatggacgcgggagagacttgttgcacctaaaagagga
agcattgtagacagaaacggcaagattttggcaatgtcaataaccgctgagacagttgtt
gcatctttgaatcagattaaagacaaagaatggacagctaaagtgctgtctggtattttg
cagatggactatcaaaagattttgaataagctcaatacaaaaggagtttcagacatctac
atagcacgcaatattgacaaagagaaggcagataagataagaaaatatgctctgccaggg
atttacttgacaggcgggacaaaaagggtgtacccaaacggcaattttctggctcaggtt
cttggttttacgggaattgatgaccagggactttctgggcttgaactttattatgacaag
tatcttcgcggcaagcccggtgccatttcagcccagactgatgcaagtggcagagctgct
ccattttcagaagagttttttaaaaagcctattgatggatatgacctaatgcttacaatt
gacgagacaattcaacattttgctgaaaagtatgcacaaaaagcgctctacgataacaaa
gcaaaaagcgtgaccataattgttgaaaaggtcaaaacaggcgagattttagccatgaca
tcaaaacctgattttgatccaaataaaccatttgagcttatatacaaagataagtttcct
gattttgataagctttctcaagcagagaaaaacaagatagtccagtcaatgtggagaaac
agagcactgacagacacatacgagcctgggtcaacatttaagatagtcaccgcagctgca
ggacttgaagaaggggttgtcaatgagaattcccagttttattgcaggggatatgttaag
gttgcaaatgcaatattaaagtgctggaggtattacaacccgcatggtagcgaaaacttt
gttgagggtgttcaaaattcatgtaaccctgtgttcatagaagtgggacagaggctggga
aaagagaaactctataaatatataaatctttttggatttgggcaaaaaacaggtatagac
cttcccggtgaggcaaaagggattattcagccgttaaacagagttggacctgttgaactt
gcaacaatttcttttggccaggggatttcagcaactcccattcaggttatcagcatgata
aatgcagttgcaaacgacggtgtgtgggtccagcctcatgttgtaaaggccatatacgat
aaggataagaagctgattaaatcttttgacacaccacgaaaaagaagagttttagaccaa
gatgttgcgcgaaggctcaagaccatacttcagtctgttgtgtcaaacggaacagggcac
aatgcctatcttctgggctataaagttgcaggaaaaacaggaacttcgcaaaagtacgac
aaaacatctaaaaagtatatagcatcatttggagggtttgcaccggccgacaatcccgag
gtgtcggttcttgttattatagatgagcctgacccttcactttattatggaggtcttata
gccgcaccagttgcaagagatttattaaatgatatactaagatatttagatatccagcca
cagtacacagctgaagaactaaaacagatagagttttataaagaatatatagtgccaaat
acaatagggatgaacattgaagatgcaaaaaaggaaatatacaataacaagttcaatgct
aaggtcataggtagtggcgacaaagtaattgaccaggtaccgaaggctggatttatgtta
aaagaaggttcgactatagtcctgttcacacatgcaatgtcgcaaacaactgtagatgtt
ccgaatgtagtgggcttaagttcccaagatgcccagaaggtacttgcaaatagtctactc
aacataaaagtgaaaggaataaaaggaaagattataaggcaaaatccacagccaggcaca
aaagttccaataggttcgattgttgaggttgaaattgctgataaagaaaatgcagaatag
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