Caldicellulosiruptor hydrothermalis: Calhy_2008
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Entry
Calhy_2008 CDS
T01346
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chd03032
]
Calhy_2008
03036 Chromosome and associated proteins [BR:
chd03036
]
Calhy_2008
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_2008
DNA replication proteins [BR:
chd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Calhy_2008
Chromosome and associated proteins [BR:
chd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Calhy_2008
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Calhy_2008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF2267
NNH1
DUF4836
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
ADQ07718
UniProt:
E4QE99
LinkDB
All DBs
Position
complement(2053232..2053507)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTDLISAMAEKSGLTKKDAEKALNAFVDAVTEALSKGEKVQLVGFGSFEVRERAERVG
RNPQTQEEIKIPATKVPVFKAGKMLKDAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatttgatttcggcaatggcagagaagagcggtcttacaaagaaggat
gctgaaaaggcactaaatgcgtttgtagatgcagtaacagaggcactctctaagggggaa
aaggttcagcttgttggttttggttcatttgaggtaagagagagggcagaaagagttggt
agaaatcctcaaactcaagaagagataaagattccagcaacaaaggtacctgtgttcaaa
gcaggcaagatgttgaaagatgctgttgcaaaatag
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