Caldicellulosiruptor hydrothermalis: Calhy_2503
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Entry
Calhy_2503 CDS
T01346
Name
(GenBank) ABC transporter related protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Calhy_2503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chd02000
]
Calhy_2503
Transporters [BR:
chd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Calhy_2503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA
AAA_22
ABC_membrane_3
AAA_15
AAA_16
nSTAND3
Rad17
AAA_30
AAA_29
RsgA_GTPase
AAA_5
AAA_23
Zeta_toxin
DEAD
SRP54
TsaE
AAA_18
AAA_24
T2SSE
APS_kinase
S_4TM
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADQ08197
UniProt:
E4Q9U2
LinkDB
All DBs
Position
complement(2637624..2639462)
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AA seq
612 aa
AA seq
DB search
MPEQRQQSSFQPPVFGPGPVPGRGPGHRFSSKGAKPKDLRATLKRLWEYFKEFKLLLLGI
FLTVTIGAILQIISPLLIQKAIDNYIIPRKLSGLYKIALAMIGIYILNSFFAYLQGYGMM
VISQRAVFKMRNDLFSKIQRMPIKIFDTRAHGDLMSRLTNDIDVVTNTLNASLTSIFSSM
ITITGSIIVMFILSPILTVLTLTVVPLMFWLTNLIATRTRKLFSQNQKLLGSLNSIIEED
ITGQKVIKVFTREAKEIQKFERVNRELTQVGIRAQIFSGIIPPLMNLLNNLAFIIVAASG
GFLALKGFITVGTIASFIQYARQFTRPLNELANQFNQIQSAFAAAERVFEIMDEEEETSF
EDEIDLQDIKGEVEFKNVWFSYTKGQPVIKNVSFKVKPGQMVALVGPTGSGKTTIVNLLS
RFYDVDSGQILIDGIDIRKINRHNLRKKLGIVLQDTFLFSEPVKENIRYGKLSATDDEVI
LASKMANAHDFIKHLPHGYNTVLTDNGMDLSQGQRQLLAIARAILSDPAILILDEATSNI
DTRTEKLVQSAMLKLMQGRTSFVIAHRLSTIRNADLILVIYNGEIIEQGTHDELLAKKGF
YYNLYMSQFVVV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagcaaagacagcaatcttcatttcagccacctgtatttggaccgggtcctgtg
ccgggaagaggtccagggcacagattttcatccaaaggtgcaaaacctaaagacttgaga
gctactttaaaaaggttatgggaatattttaaagagtttaagcttttgctattaggaata
tttttaactgtcacaataggtgcaattttgcagattatctctccccttttgattcaaaaa
gctatagacaactatataattcccagaaaacttagtggactttataaaatagctttggca
atgataggaatttacattctcaattctttttttgcttatcttcagggctatggaatgatg
gtaatttcgcaaagagcagttttcaagatgcgaaatgaccttttttcaaaaattcagaga
atgccaataaagatttttgacacaagagcgcatggagatttgatgtcgcgtctgacaaac
gacattgatgttgtgacaaataccttgaacgcaagcttgacttcaatattttcaagtatg
ataaccatcacagggtcgataattgtaatgttcattttaagccctatattgacagtttta
acattgacagttgtgccacttatgttttggcttacaaatcttattgcaacaagaacaaga
aagttgttttcacaaaaccaaaagcttttgggaagtttgaatagtataatcgaggaggat
ataacaggtcagaaggtcatcaaggtttttacaagagaggcaaaagagatacaaaagttt
gagagggtaaacagagagcttacacaggttgggataagagcacagatattttcaggaatc
attccacctcttatgaaccttttgaacaaccttgcgtttatcattgttgcagcatcaggt
ggttttttggcacttaaaggctttatcacggttggcacaattgcaagttttattcagtat
gcaagacagtttacaaggccactcaacgagcttgcaaaccagttcaatcaaattcaatct
gcatttgccgcagcagagagagtatttgagataatggatgaggaagaagagacctctttt
gaagatgaaattgacctgcaagacatcaaaggcgaagttgaattcaaaaacgtgtggttt
tcatatacaaaaggtcagcctgttattaaaaacgtgagctttaaagtaaaacccgggcag
atggtagcactggttggtccaactggaagcggtaaaactacgattgtaaatttgcttagc
agattttatgatgtagacagtggtcaaattttaattgatggtattgacataagaaagatt
aacagacataatctcagaaaaaagcttgggattgttcttcaagacacatttttgttttca
gaacctgtgaaagaaaatattcggtatggaaaactttctgcgactgacgatgaagtgata
ttagcttcaaagatggcaaacgcacatgattttatcaagcatcttccgcatggttataat
acagtgcttacagacaacggaatggacttaagccaaggtcagcgccaacttttagctata
gctagagcaattttgtctgacccagcaattcttatcttggatgaggcaacaagcaacatc
gatacaagaacagaaaagcttgtccaaagcgcaatgctaaagctcatgcagggaagaaca
agttttgtaatagcccacagactttccactatcagaaatgcagacctcatccttgtcata
tacaacggtgaaattatcgaacagggtacacacgatgagcttttagcaaagaaagggttt
tattataatctatatatgagccagtttgtggtagtgtga
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