Caldicellulosiruptor hydrothermalis: Calhy_2582
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Entry
Calhy_2582 CDS
T01346
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Calhy_2582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_2582
Enzymes [BR:
chd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Calhy_2582
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calhy_2582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
PIF1
nSTAND3
DEAD
AAA_22
Helicase_RecD
SLFN-g3_helicase
AAA_24
AAA_23
AAA_12
T2SSE
HHH_2
NTPase_1
AAA_29
NPHP3_N
UvrD_C
ATPase_2
HerA_C
ABC_ATPase
AAA
PhoH
AAA_25
MeaB
ABC_tran
5_3_exonuc
AAA_28
Mg_chelatase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADQ08271
UniProt:
E4QAG7
LinkDB
All DBs
Position
complement(2726866..2729091)
Genome browser
AA seq
741 aa
AA seq
DB search
MQQNIQGMVSDIIYRNLENNYTVFEIICNDEVFTAVGIVPDIAIGEKVSVYGEFYVHPVY
GQQLKVSYLEKLLPQTKDEIYLYLSSGVIKGIGQKTAKKIVDTFGDDTARILQEEPEKLL
SIRGMTPEKVERIRNMFAFQKFLKDIMSIFSQYGFSQNHAMRLFKLYGFSALSLLQENPY
FLLDVFPELDFKKVDRLALDMGVMPDDRRRISAKILNLLTLAANNEGHTCLPENKLKQLC
IRTLDLPVEKIEEAIEALAQERRIVKDEVDSQEMVFLYGYYECERYIADKILSMLKEYDD
IADIDEKISSFEEKNGIAFSPNQKKAIKMALTQGVSIITGGPGTGKTTIIKCIIQIFEGE
GKKVFLCAPTGRAAKRMQAACERESKTIHRLLEMTVLDTHVIFQRGPNNPLKCDAIVVDE
MSMVDSFLMNYLLAATKPTTRIVLVGDKDQLPSVGAGNVLKDLIKSQIVPCTTLTEVYRQ
SENSFIVLNAHRINRGEFPHLQKESDFYFIQKNSQEEILKTVIELVTKKLPNYLSCDPMT
DIQVLCPSKKGIVGMYNLNRVLQQYLNPPHPSKKEYAYKENLFRVGDKVMQVKNNYSLEY
EIVQGEEKGRASTGIFNGDIGVVKDIDRSQGALEILFDDEKLVYYDFSLLDDLELAYAMT
VHKSQGSEFRCIVMPVVETYPILMTRNLLYTAVTRAKELVVLVGKKSALEYMIANQKEAM
RYSALCDFLLRGQSNMQLQVL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaaacattcagggcatggtaagtgatataatctacaggaatttggaaaacaac
tatacagtgtttgagataatctgtaacgatgaagtgttcacagcagtagggatagttcct
gatatagcaattggtgaaaaggtaagcgtgtacggtgagttttatgttcatcctgtttat
ggtcagcaacttaaagtaagctaccttgaaaagctattgccacagacaaaggatgagata
tatctttatctttcctctggagtgataaaaggtatcgggcaaaagactgcaaagaagatt
gttgatacctttggagatgacaccgcaaggattttgcaggaagagccagaaaagcttttg
agtattcgcggcatgacgcctgaaaaggttgagcggataaggaacatgtttgcgttccag
aaatttttgaaagatatcatgtcaatcttttcacagtacgggttttcacagaaccacgca
atgcgactttttaagctttatggattttctgctctgtcacttttgcaggaaaatccatat
tttcttttggatgtattcccggagcttgactttaaaaaggttgacaggcttgcacttgat
atgggagttatgccggatgacagaagaagaatatctgccaaaatactcaatcttttgaca
ttggcagcaaacaacgaagggcacacctgcctgccagaaaataagctcaaacagctctgt
atcagaacccttgaccttccagtggaaaaaatagaagaggcaattgaagctttagctcaa
gaaagaagaattgtgaaagatgaagttgactctcaagagatggtgtttttgtacggctac
tatgagtgtgaaaggtatatagcagacaaaatcctgtcaatgctaaaagagtatgatgac
attgctgatatagatgaaaaaatttcttcttttgaagaaaaaaacggtattgcattttcg
ccaaatcagaaaaaagctatcaagatggcgctgactcaaggtgttagcatcataacaggc
ggtcctggcacaggaaagaccacaatcataaaatgtatcattcagatttttgagggtgaa
ggcaaaaaggtttttctctgcgcaccaacaggaagagctgcaaagaggatgcaggcagcc
tgtgaaagagaatcaaaaacaatccacagacttttggagatgacagttttagacacacat
gttattttccaaagaggaccaaataatcccttaaaatgcgatgctatcgtggttgatgaa
atgagcatggtagacagtttccttatgaactatcttcttgctgcaacaaagccgacgaca
agaattgtccttgttggagacaaagaccagcttccatctgttggtgcaggaaatgtctta
aaagaccttataaaaagccagattgtgccgtgcacaactttgacagaggtgtatcgccag
agcgaaaatagttttatagttctcaacgctcataggataaacagaggtgagtttccacac
cttcaaaaggagagcgatttttattttatccagaaaaactctcaggaagagattttaaaa
actgtaattgagcttgtgaccaaaaaacttccaaactatctttcgtgcgacccgatgaca
gacatccaggttctgtgtccttccaaaaagggaattgtgggaatgtacaacctaaaccgc
gtgctgcagcagtacctcaacccacctcatccatctaaaaaggagtatgcctacaaggaa
aacctgttcagggttggcgacaaggtcatgcaagtgaaaaacaactattcgttggaatat
gagattgtacaaggagaggagaagggcagggcctcaacagggatattcaacggcgacatt
ggagttgtaaaggatatcgacaggtctcaaggtgctttggagattttgtttgacgatgaa
aagcttgtgtattatgacttttcgctgcttgacgacttagagcttgcatatgccatgact
gttcacaaatcacagggctcagagtttaggtgcatagtgatgccggttgttgagacctac
cccattttgatgacaagaaaccttctttacactgctgttacacgagcaaaagaacttgtt
gtgctggtgggtaaaaaaagcgccttagagtatatgatagcaaaccagaaagaagctatg
cgatattcagcactttgcgactttttactgcgcgggcaatcaaatatgcaattgcaagtt
ttatga
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