Cardinium endosymbiont cEper1 of Encarsia pergandiella: CAHE_0238
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Entry
CAHE_0238 CDS
T02243
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
che
Cardinium endosymbiont cEper1 of Encarsia pergandiella
Brite
KEGG Orthology (KO) [BR:
che00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
che03032
]
CAHE_0238 (gyrA)
03400 DNA repair and recombination proteins [BR:
che03400
]
CAHE_0238 (gyrA)
Enzymes [BR:
che01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CAHE_0238 (gyrA)
DNA replication proteins [BR:
che03032
]
Prokaryotic type
DNA Topoisomerases
CAHE_0238 (gyrA)
DNA repair and recombination proteins [BR:
che03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAHE_0238 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Mago_nashi
MvcA_ins
Motif
Other DBs
NCBI-ProteinID:
CCM10019
UniProt:
K0P200
LinkDB
All DBs
Position
complement(244949..247537)
Genome browser
AA seq
862 aa
AA seq
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MEPTPSDRIIPINIEDEMRDAYIDYSMSVIVARALPDVRDGLKPVHRRVLYGMYELGLSQ
SKTYKKSARIVGEVLGKYHPHGDVPVYESLARMAQSWALRYPLIEGQGNFGSIDGDAPAA
MRYTEARLVRVSEELIKEINKNTVDFQLNFDASLEEPVVLPAKLPNLLLNGASGIAVGMA
TNMAPHNLSETLSAIVAYIEDHDITIPDLMEYMIAPDFPTGGIIYGYSGVREAFQTGKGR
ILLRGKATVEVSANGKEQIIVTEIPYQVNKAVMIERTAQLVNEKKIEGIADIRDESDKEG
MRIVYDLKRDAIAHVVLNNLYKQTQLQSSFSVNNVALVEGRPKILNLKALIVHFVDHRHE
VLVRKTTFDLEHAKKKIHLLEGYLIALDHLDKVIALIRGSKDAEIAKAALMETFPLSALQ
VKAILEMRLQRLTGLERAKIIEEYHQVQKLIDHLLAVLADKPLRMQLIKEELMELKERYG
DARRTVVEYEADAFTMEDMIPDTEMVIMISNQGYIKRTPLVDYRLQGRGGVGAKGITTKK
DDVTAHLFIATAHQYLLIFTEYGKIYWVKVYTIPETKKATQGKAIQNLINIAPGDQVRSI
IQVRDLQDQTYVDQHYVVMSTRQGIIKKTPLRAYAIPRANGIHAIVIRAGDSLLDVQLTN
GTHHIVLALASGRATQFNEQDVRPMGRVASGIRGITLAHEQDRVIGMACFPTSDWDVLVV
SENGYGKRSSLLDYRITKRGGKGVKTMQITEKTGKLVAIHAVKNQDELMIMNQAGLAIRI
QVSTLPLIGRATQGVRLIRLGQEDKVVSVARIDMLDEVDGPDHKVPSDVAEMGIAPASGD
QVIEEDLALREEIEGLDDPIED
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggagccaacaccatcggatcgtattatcccaattaatatagaggatgaaatgcgggat
gcctacatagattattctatgtctgtgattgtcgctagggcactccccgatgtgcgcgat
ggtttaaaacctgtgcataggcgcgtattgtatggtatgtatgagcttggtcttagtcag
agtaaaacttacaagaagtctgcaagaattgtgggggaagtattgggtaagtaccatcca
catggtgatgtacccgtttatgaaagcttagcccgtatggcccaaagttgggcactccgt
tatccgctcatagaagggcaaggtaactttggatccatcgatggagatgcgcctgccgct
atgcgttataccgaagcccgtttggtacgcgtttcggaagagcttattaaagaaataaat
aaaaatactgttgattttcagcttaactttgatgcctctttagaagaacccgttgtatta
cctgctaaacttcccaatttgcttttaaatggcgcttctggtattgcagtcggtatggcc
accaatatggcgcctcataatctatcagaaacattaagcgctattgtagcctatattgag
gatcatgatataaccattcctgacttaatggaatatatgattgcccctgattttcctact
ggaggcataatttatggctacagtggggtacgtgaagcctttcaaacaggcaaagggcgt
atcctattgcgcgggaaagctacagtggaagtgtctgccaatgggaaagagcaaattatt
gtaacagagataccatatcaagtgaataaagcggttatgatagaaaggaccgcacagctg
gttaacgaaaaaaaaatagaagggattgccgatattcgagatgaatctgacaaagaaggt
atgcgtattgtgtatgaccttaagcgggacgcaatcgcccatgttgtactcaataacctc
tataaacaaacccagttacaaagctctttcagtgtgaacaatgtcgccttggtggaaggt
aggcctaaaattttaaacctcaaagcacttattgttcattttgtagaccatagacatgaa
gtattggtacgaaaaaccacctttgatttagaacatgcaaaaaagaaaatacatctgtta
gagggttatcttattgctttggatcatttagataaggttatcgcattgattcgtggttca
aaggatgcagagatcgctaaagctgcattgatggagacctttcctttgagtgcgctacaa
gtaaaagccattctagagatgcgtttgcagcggcttacaggtttagaacgggctaagatc
atagaggaataccatcaggtacagaaactgattgaccatttattggctgtattggctgat
aaaccgcttcgtatgcagttgattaaagaggagttgatggaactgaaagagcgttatggc
gatgcacgtaggactgtagtggaatatgaagcagatgcctttaccatggaagatatgatt
ccagatactgaaatggtcattatgatttccaatcaaggttatattaaacgcacaccactg
gttgactaccgtctacaaggtcgagggggtgtaggagctaagggcattactactaaaaaa
gatgacgttaccgcccatctatttatcgctactgcgcaccaatatttgctaatatttacc
gaatatggtaaaatctattgggtaaaggtgtataccataccagaaactaagaaagctaca
caaggaaaagccatacaaaacttaatcaatatagcgcctggagatcaggtccgtagtatc
attcaagttagggatttgcaagatcagacctatgtggatcagcattatgtcgttatgtct
actaggcaaggaatcattaaaaaaacaccccttcgtgcctatgctatcccacgtgccaat
ggcattcatgcgattgtaattcgagcaggcgattcgctattagatgtacagctgaccaat
ggtacccatcacattgtattggccttggcctctggtagggctacacaatttaatgaacaa
gatgtacgtcctatgggacgggtagcttccggcataaggggcatcaccttagcccatgaa
caggatcgtgtaattggcatggcctgtttcccgacatcagattgggacgtcttggtagtt
tctgaaaatgggtatggcaaacgttcctcccttttagattatcgtattaccaaaagaggc
ggtaagggagtaaaaaccatgcaaattactgaaaaaaccggaaagctagtggccattcat
gcggtaaaaaaccaggatgaattgatgattatgaaccaagctggtttggccattcggata
caagtaagtaccttaccccttataggcagagcgacacagggtgttcggttgattcgattg
ggacaagaggataaagtagtttctgtagctagaatagatatgttagacgaggtagatggg
ccagatcataaagtgccatccgatgtagcagaaatgggtatagctccagcgtcgggtgat
caagttatagaagaagatctagccttacgagaagaaattgaaggtttagatgatccaata
gaagattaa
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