Cardinium endosymbiont cEper1 of Encarsia pergandiella: CAHE_0521
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Entry
CAHE_0521 CDS
T02243
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
che
Cardinium endosymbiont cEper1 of Encarsia pergandiella
Brite
KEGG Orthology (KO) [BR:
che00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
che03032
]
CAHE_0521 (gyrB)
03400 DNA repair and recombination proteins [BR:
che03400
]
CAHE_0521 (gyrB)
Enzymes [BR:
che01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CAHE_0521 (gyrB)
DNA replication proteins [BR:
che03032
]
Prokaryotic type
DNA Topoisomerases
CAHE_0521 (gyrB)
DNA repair and recombination proteins [BR:
che03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAHE_0521 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCM10298
UniProt:
K0P638
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All DBs
Position
542647..544596
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AA seq
649 aa
AA seq
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MTPTINDYSADNIQVLEGLEAVRKRPAMYIGDVGVKGLHHLVWEVVDNSIDESLAGHCTK
IGIIIHENNAITVWDNGRGIPTGMHLKEQKSALEVVMTILHAGGKFDKGTYKISGGLHGV
GVSCVNALSAHLAVTVYRNGKIYKQEYAQGVPCYSVKEIGTTALRGTTVHFRPDSSIFTT
TVYNLHTIINRLQELAYLNVGLKMQLEDRREQDEQGNPFQQTFYSEGGLLEFVSHLERTK
TSIMPTPILIEGEKNNIGVQVAMTYNTGYSETVVSYVNNIHTIEGGMHVTGFKRALTRTL
KNYADKSGLLEKAKIEIIGDDFREGLTAVISVKVAEPQFEGQTKTKLGNAEVQSAVESCV
AEVLHYYLEEHPKEAKLIVNKVIVAAQARQAARKAREMVQRKNVLMSNSLPGKLADCSER
DPTLCELFLVEGDSAGGTAKMGRNRRFQAILPLKGKILNVEKAQAYKIYDNEQVRNMITA
LGVAIGTDSNEQAINLDKLRYHKIVIMTDADVDGSHIRTLILTFFFRYMRDIIEKGHLYI
ASPPLYLVKRDKEEHYCWTESEKEEWVTQFSLKDGKVDAVFVQRYKGLGEMNEIQLWDTT
MDPTRRNLRQVTIASALAAEHLFSMLMGDEVPPRREFIEHYAKYAKLDI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacccctactattaatgactattcagcagataatatccaagtcttagaagggctagaa
gctgttcgcaaacgtcctgccatgtacattggggatgtaggcgtaaagggattacatcat
cttgtgtgggaagtagtagacaactctattgatgagtctttagcaggccactgtactaaa
attgggattattatacacgaaaacaatgcgattactgtatgggataatggtcgtggcatt
cccactggcatgcatctaaaagaacagaaatcagctttggaggtagtcatgaccatactg
catgcaggtggtaaatttgataaaggtacctacaaaatttctggcggtttgcatggtgta
ggggtttcttgtgtaaatgcactatctgctcacttagcggttaccgtataccgaaacgga
aagatttataagcaagaatatgcacaaggcgttccatgctactctgttaaagaaataggt
actacagcactacggggcactaccgttcattttaggccagatagttctatttttacgact
acggtctataacctacataccattattaatagactgcaagaattggcctatttaaatgta
gggctaaagatgcaactagaagatcgtcgtgaacaagacgaacaaggtaacccttttcaa
caaactttttactctgaaggaggccttctagaattcgtttcccatctagagcgcaccaaa
acctccattatgcccacgcccatccttatagaaggagaaaaaaataatataggcgtacag
gttgccatgacgtataatacaggctattctgaaacagtagtttcttatgtaaataacatt
catacgattgaaggaggtatgcatgtaactggatttaaaagagctttaacccgcacttta
aagaactacgcagataaatctggcttactagaaaaagccaaaatagagattattggagat
gactttcgggaaggactaactgctgtaatttctgtaaaagtagctgaacctcaatttgaa
ggacaaacaaaaaccaaactagggaatgcagaagtacaaagtgctgtagaaagctgtgta
gctgaagtattacattactacctagaagaacatcctaaggaagcaaaactgattgttaac
aaagttattgtagccgctcaagcccgccaagctgcccggaaagcacgtgaaatggtacaa
cgcaaaaatgtattaatgagcaacagcttgcctggtaaattagcagactgttccgaacga
gaccctacgctttgtgaactctttctggtagagggtgactctgctggtggtactgctaaa
atgggtaggaacagaagattccaagccattcttcctttaaaaggtaaaattttgaatgta
gaaaaagcacaagcatataaaatatatgataatgagcaagtcagaaatatgatcactgca
ctgggtgtagcgataggtacagatagtaacgaacaagcgattaatctagataaattacgt
taccacaaaattgtgattatgactgatgcagatgtagatggtagccacattcgtaccctt
attttaacttttttcttccgctacatgcgggacattatagagaaaggacatctgtatatt
gcctctcctccactctatctggtgaaacgagataaagaagaacactattgctggacagaa
tcagaaaaagaagaatgggtcacacaatttagccttaaagatggaaaagttgatgcggta
tttgtccagcgttataaaggtttgggcgagatgaatgagatccaactttgggatactact
atggatccaacacgtcggaacctaagacaggtaactatagcctctgcattggcggcagaa
catcttttctctatgttaatgggggatgaagtgccccctcgtagagaatttatagaacat
tatgccaaatatgctaaattggatatttag
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