Chelativorans sp. AA-79: PVE73_14925
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Entry
PVE73_14925 CDS
T09422
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
chea
Chelativorans sp. AA-79
Pathway
chea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVE73_14925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chea03019
]
PVE73_14925
Enzymes [BR:
chea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVE73_14925
Messenger RNA biogenesis [BR:
chea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVE73_14925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
HEM4
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WEX07413
LinkDB
All DBs
Position
complement(3061440..3062777)
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AA seq
445 aa
AA seq
DB search
MTNDNIAKPEGFARLGITGALLNAANAAGMTEPKPIQEKAIPPFLAGRDILGVAQTGSGK
TAAFSLPILSRIIGLGNKRRPRTARALILVPTRELAVQIEKVVRDLSKGAHISTALVLGG
VSRHSQVKRMAPGVDVLIATPGRLTDLVREGDVVLSETTWLVLDEADRMLDMGFINDVRR
IAKATHPARQTALFSATMPKEIEMLTASLLREPVRIEISPQGTTAAEVRQSVVMARTKQK
RLVLAEMLADEKMGQVIVFARTKHGADRVTRDLQRDGFDAAVIHGNKSQNARQRALNDFR
DGSVRILVATDIAARGIDVPGISHVVNFDLPDEAESYVHRIGRTARNGADGEAVTLCDPS
ESSKLRQVERVIRMRLPIVKDVTREPDAARSNVTPLPANDRPRGGKPEARPTKSAGDRTA
SKPPRRKRNRKGGPKGAVRFASRAA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaatgacaatattgcgaaaccagagggtttcgcccgcctcgggatcaccggcgcc
cttctgaacgccgccaacgccgccggcatgaccgagcccaagcccatccaggagaaggcg
attccgcctttcctcgcgggacgcgacattttgggcgttgcccagaccggctccggcaag
acagccgccttttcgctccccatcctttcgaggatcatcggactcggcaacaagcgccgc
ccgcgcacggcgcgggcgctgatcctcgtgccgacgcgggagcttgcggtgcagatcgaa
aaggtcgtgcgggacctttccaagggcgcccatatctccaccgcgcttgtcctgggcggc
gtttcgcgccactcgcaggtgaagcggatggcccccggcgtcgacgtcctgattgccact
cccggccggctgacggatctggtgcgcgagggtgatgtggtgctttcggagaccacctgg
ctcgtgctcgacgaggcggaccgcatgctcgacatggggttcatcaatgatgtccggcgc
atcgccaaggcgacgcacccggcgcgccagaccgcgctcttctcggccaccatgccgaag
gaaatcgagatgctgacggcgagcctgctgcgcgagccggtccgtatcgagatatcgccc
cagggcacgacggcggcagaagttcgccagagcgtggtcatggcccgcaccaagcagaag
cgcctggtgcttgccgaaatgctcgccgacgagaagatgggccaggtgatcgtgttcgcc
cgaaccaagcacggtgctgaccgcgtgacccgcgatctccagcgcgacggcttcgacgca
gccgtgatccacggcaacaagtcccagaacgcccggcagcgggcactgaacgattttcgt
gacggttcggtgcgcattctcgtggcgaccgacattgccgcgcgcggcatcgacgtgccc
ggcatcagccatgtggtgaatttcgatctgccggacgaagcggaaagctatgttcaccgc
atcggccgcacggcgcgcaacggcgccgacggcgaagcggttacactgtgcgatccgagc
gagtcgtcgaagctccggcaggtggagcgggtcatccgcatgcggctcccgatcgtgaaa
gatgtcacgcgggaacccgatgccgcacggagcaacgtcacacccttgccggccaatgac
cgcccgcgcggcggcaagcccgaagccaggcccacgaagagcgcgggcgaccggacggcg
tcaaaaccgccgcgccgcaagcgcaatcgcaagggtggcccaaagggcgcagtccgcttc
gcgtcccgcgccgcctga
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