Chelativorans sp. AA-79: PVE73_15255
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Entry
PVE73_15255 CDS
T09422
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
chea
Chelativorans sp. AA-79
Brite
KEGG Orthology (KO) [BR:
chea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chea03016
]
PVE73_15255 (rnd)
Enzymes [BR:
chea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PVE73_15255 (rnd)
Transfer RNA biogenesis [BR:
chea03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PVE73_15255 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
WEX07477
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All DBs
Position
3130633..3131811
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AA seq
392 aa
AA seq
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MDLIKSRQELEKAVAALEKSEFVTIDTEFIRETTFWPELCLIQMASPDVTALVDPLAEGM
DLAPFFRLMADENVVKVFHAARQDIEIIYNRGGLIPHPIFDTQVAAMVCGFGDSISYDQL
VLKITGEHIDKSSRFTDWRHRPLSEKQLRYALADVTHLIPVYEHLKEELVREGREGWLKE
EMDVLTACETYDPHPDDAWKRLKMRARKPIELAVLQHIAAWREREARERNVPRGRVMKDD
ALYEVAQQQPRDVSALGRLRTVPKGWERSAPAAGLLKAVNDALALPKEELPKLPRHQQAP
EGAAAAAELIKVLLKLVAEKEGVAPKMLASTDDIERIAADGEKADVPALHGWRREVFGDQ
ALRLLRGEIALRFASRRIETFTPDSALQNAAE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatcaaatcgcgccaagagctggaaaaggcggtcgccgcgctcgaaaaatcc
gaattcgtcacgatcgacaccgagttcatccgggaaaccaccttctggccggagctctgc
ctgatccagatggcctcgcccgacgtcacggcgctggtggaccccctggcggaagggatg
gacctcgctcccttcttccgcctgatggcggacgagaatgtggtgaaggtgttccacgcg
gcacggcaggacatcgagatcatctacaaccgcggcgggctcatcccgcacccgatcttc
gacacccaggtcgcggccatggtctgcgggttcggcgacagcatctcctatgatcagctc
gtgctgaagatcaccggagagcatatcgacaagagctcgcgcttcaccgactggcgccat
cgccccctttcggaaaagcagttgcgctatgcgctggccgacgtcacgcatctcataccg
gtttacgagcatctgaaggaagagctcgtgcgcgaggggcgtgagggatggctgaaggaa
gaaatggatgtgctgacggcgtgcgaaacctacgatccgcacccggacgacgcctggaag
cgactcaagatgcgcgcgcgcaagccgatcgagcttgccgtgctgcagcacatcgccgcc
tggcgcgagcgcgaggcgcgggagcgcaacgtaccgcgcgggcgcgtcatgaaggacgat
gcgctctacgaggtcgcccagcagcagccgagggacgtctctgcgctcggccgcctcagg
accgttcccaagggctgggagcgttctgccccggccgccggccttctcaaggccgtaaac
gatgcgctcgcgctgccgaaggaagagctgccgaaactgcccaggcaccagcaggccccc
gagggagcggccgccgccgccgaactcatcaaggtcctcctcaagctggtggcggagaag
gagggcgtggcgcccaagatgctcgcctcgaccgacgatatcgaacgaatcgcggccgac
ggagagaaggcggacgttcccgccctccacggttggcggcgcgaggtgttcggcgaccag
gcgctgagactcctgcgcggagagatcgcgcttcgctttgccagtcgccggatcgaaaca
ttcacgccggacagcgcgctgcaaaacgcggcggagtga
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