Chelativorans sp. AA-79: PVE73_16560
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Entry
PVE73_16560 CDS
T09422
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chea
Chelativorans sp. AA-79
Pathway
chea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVE73_16560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chea03400
]
PVE73_16560
Enzymes [BR:
chea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PVE73_16560
DNA repair and recombination proteins [BR:
chea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVE73_16560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WEX07711
LinkDB
All DBs
Position
3380463..3381329
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AA seq
288 aa
AA seq
DB search
MIPTTPLDPAGLRELLSFYADAGVDEPLTEEPSNRFEERSSRAAAPEATRPADLAAAGNA
PAPARAPAAPAQPVPRPAQPAAIPDEAQAARARELARQARTLDELKAILADFDGCNLRHT
AKNLVFADGNPEADFMLVGEAPGRDEDLQGLPFVGRSGQLLDRMLAAIGRDRTSAYISNV
IPWRPPGNRDPSPLETEICRPFIERHVELVAPKVLVTLGNPSTKLLLGTQTGIMRMRGTW
SVHRTQSGMEIATMPTLHPAYLLRNPAHKKLTWRDFLAIKMRLRELEG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgaccacgcctctcgaccctgcgggccttcgcgagctgctctccttctacgcc
gacgccggtgtggacgagccgctcaccgaagagccgtcgaaccgtttcgaggagcgaagc
tcccgcgcggccgctcccgaggcgacgcggcctgccgatctcgcagcggctggcaatgcg
cctgcccccgccagggcaccagcggcgccggcccagccggtgcccaggcccgcgcagccc
gccgccattcccgacgaagcccaggccgcccgcgcgcgcgaactggcgcggcaagcgagg
acgctcgacgagttgaaggcgatactggccgacttcgacggctgcaacctgcgccatacg
gcgaagaacctggtcttcgccgacggcaaccccgaagcggatttcatgctggtgggcgag
gcgccgggccgggacgaggacctgcagggcctgcccttcgtcgggcgatccgggcagttg
ctcgaccgcatgctcgcggcgatcgggcgcgaccggacatcggcctatatcagcaatgtg
attccgtggcgcccccccggcaaccgcgacccctcgcccctcgaaacggagatctgccgg
cccttcatcgagcggcacgtcgagctggtcgcgccgaaagtgctggtcaccttgggcaat
ccttcgaccaagctcctgctcggcacgcagaccggcatcatgaggatgcgcggcacatgg
tcggtccacaggacccaaagcgggatggagatcgcaaccatgccgacgctccacccggcc
tatctcctgcgcaatcccgcacacaagaaactcacctggcgcgatttcctggccatcaag
atgaggctgagggagttggaggggtga
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