Cohnella herbarum: HH215_03280
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Entry
HH215_03280 CDS
T08421
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cheb
Cohnella herbarum
Pathway
cheb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HH215_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cheb03400
]
HH215_03280
Enzymes [BR:
cheb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HH215_03280
DNA repair and recombination proteins [BR:
cheb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HH215_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Emfourin
Motif
Other DBs
NCBI-ProteinID:
QJD82300
UniProt:
A0A7Z2VG37
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All DBs
Position
803115..804476
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AA seq
453 aa
AA seq
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MDPARALSIRDINRLIKMKLEGDTGLQDIWLRGEISNFTFHSSGHMYFTLKDEGARLKCI
MFASYNARLPFAPKDGMKVLARGGVSVYERDGQYQFYATAMQPDGIGSLYLAFEQLKRKL
DSEGLFLEHLKRQLPSYPRTVGVITSPTGAAVRDILITLERRNPGVHVLLYPVSVQGKGA
APSIVKAIQAMNAHGEADVLIVGRGGGSLEELWAFNEEAVARAIRASAIPVISAVGHETD
FTISDFAADLRAPTPTAAAELAVRHTGELMMGLVHLEQRMTKSLSALLGRARERWQHAAR
SPYFTQPRRSLLVQAERLDRLRDRLQYRIRTEQSRAQERLSRLKGRLSAVNPNQQAAFAR
KRIVSATRGLELAMNGILRQRQSQYGSIVRHLDALSPLKVMARGYSLVYDEQEKSLVRTI
NEVQPGDLIRVRLTDGKLDCQVWGIHGEERTNG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacccggcgcgcgcgttaagcattcgcgacattaaccgcctcattaagatgaagctt
gaaggcgacaccggactccaagacatctggctaagaggcgaaatatccaactttacgttc
cattccagcggccatatgtattttacgctgaaggacgaaggcgcaagactgaaatgcatc
atgttcgcctcctataacgccaggcttccattcgctccgaaggacggaatgaaagtgttg
gcgcgcggcggcgtttccgtatacgaaagagacgggcaatatcaattttacgcgacggcg
atgcaaccggatggcatcgggagcttgtatttggctttcgagcaattaaagaggaaactc
gattcggaaggcctattccttgaacatcttaagcgtcaattgccgtcttatccgcgtacg
gtaggcgtaattacctcgcctacaggggcggcggtgcgggatattctgatcacgctcgag
cgtcgcaatcccggggtgcacgtattgctgtatcccgtatccgtgcaaggaaaaggcgca
gcgccgtcgatcgtcaaagcgatccaagcgatgaacgcgcatggcgaagcggacgtactg
atcgtcggacggggaggcggatcgcttgaagaattatgggcttttaacgaagaggccgtc
gcaagagcgattcgggcttcggcaatccccgtaatttccgccgtcggccatgagaccgac
ttcacgatctccgatttcgcggcggatctaagagcgcctacgcctacggcagccgcggag
cttgccgtaagacatacgggcgagcttatgatgggcttggtgcatctggagcagagaatg
acgaagtcgctgtccgctttgctcggcagggcaagggaacgttggcagcatgcggcgaga
tctccgtatttcacgcagccaaggagaagcttgctcgttcaagcggagcgcctggacagg
ctaagagaccggctgcaatatcggattcgaaccgaacaatcccgcgctcaggagcgatta
tcgcgtttgaaaggaagattgtccgcggttaatccgaatcagcaggcggcgttcgcccgc
aagaggatcgtctcggcgacgagagggttggagcttgccatgaacggtatccttcgccag
cgccaaagccagtacggctcgatcgttcgccatttggacgctttgagcccgttaaaggta
atggcgcgcggatacagcttagtatatgacgagcaggagaaatcgttggttcgtacgatt
aacgaggtgcaaccgggcgacttgatccgcgtaagattgacggacggcaaattggattgc
caggtttggggcattcatggggaggagcgaaccaatggctaa
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