Cohnella herbarum: HH215_05000
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Entry
HH215_05000 CDS
T08421
Name
(GenBank) efflux RND transporter permease subunit
Organism
cheb
Cohnella herbarum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF5367
Motif
Other DBs
NCBI-ProteinID:
QJD87984
UniProt:
A0A7Z2VRT4
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Position
1174496..1177570
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AA seq
1024 aa
AA seq
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MNKVAAMFILIAIVLGAGSYAGSSLKVENMPDISFPFIYIVTEYQASPQDVMNLVTKPIE
DKIANIAGLTMMSSSSNDGYSTVNLEFKESINVEKTKQDLESIVQEVGLPKEAGRPKVAT
VGYASFPSYYLAVHANDSMTQTELDELYDKELKPGFESISGIDHIDTIGARKSSLDIRLD
GGALAAYRLTPSMVTNAIQSAMTNGSVGIVKFNGNSQIARVKGELNSLYDLENLEISTPT
GQTLLIKDISDIEAINESSFIARLDDKPAIGIHLYMSRGTNAVDFSNEAKQKISDWEKST
PGISFNTVYDSADEVRQSISGLLKEGFLGIILASLMILVFLRNMRMTLIVIVSIPLSVLL
TLVVMNYLNITLNIMSLGGLFIAVGRIVDDSIVVIESIYANLQKAQKRNESVVLLAVKQV
AMAISSSTFVTVGVFLPIAFVTGIIGALFRPFAVTVSVALLASLLVSLTVIPMMAKLMVL
RNAKAMGTKEHEGGKLVSFYERTLVWCLTHRMKTLLLSGLLFILTIVFTVPNLPKGFIPE
GPPVKQMNYSIKLPYETSFDSTDLQAKQLETMLLEAKDENDRSMFTFVESLVGYGWSEER
VPYMIELITQVNDDVDPDTVKERYRKLIADQLPKGSEVMSGSLAGGSGSSSVDFVYVIYG
EDQLMLEQAAATIKNEMKQFSELKEIKDSLGDAKTEIQIAVSPSKANLFGLDVSGVQRLV
AEWIAKYELGNIRLDNTLFKSAVELASKDKDSLDQLGRMPIQAADGTIVHLNEIAKLGEV
KSPLSLQRESQRLMVSITAKIDSNDKAAISSKVSSQLEQLELPSGVSTTIRGVSLDMAKG
FTQMFAAMGAAIAIVYLIMVLCFGNAGTPFAILFSLPLAVIGGLLGLWIAKESINITSLI
GFLMLIGIVVTNAIVLLDRTQQLRKEGYLARHALIESGKVRLRPIIMTAGATIAAMVPLA
LGLSHGTLISKGLAVVVIGGLITSTILTLVVVPIIYELIESFKARLNRMFNRKNRTTAGE
DISL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtagcggctatgtttatcttgatcgcaatcgtgctaggggccggaagttac
gcgggcagctcgcttaaagtagagaacatgccggatatttcttttccgtttatctacata
gttaccgagtatcaagcctcgccgcaagacgtaatgaacttggtcacgaaaccgatcgag
gacaagattgccaacatagccgggttaacgatgatgagttcgtcgtcgaacgacggatac
tcgacggttaacctggagtttaaagaaagcattaacgtcgagaagacgaagcaagaccta
gagagcatagttcaggaagtcggcctgcccaaggaagccggaagaccgaaagtcgcgacc
gtgggttacgcctcttttccttcgtattatttggccgttcatgcgaacgactcaatgact
cagaccgagctggatgagctatacgacaaggaattaaagcccggtttcgaatcgataagc
gggatcgatcatatcgatacgatcggtgcccgaaagtcctctctcgatatccggttagac
ggaggagcgttggccgcttataggttaacgccatccatggttacgaacgcgatacaatcc
gcgatgacgaacggttcggtcggaatcgtcaagttcaacggcaattcgcagatcgcccgc
gtgaagggggagttgaacagtctttacgatctggagaacttggaaatctcgacgccgacg
gggcaaacgttgctcatcaaggatatatccgatatcgaagcgattaatgaatccagtttt
atcgcgaggttggatgataagcctgctatcggtattcacctgtacatgtcgcgaggcacg
aacgcggtcgatttctccaatgaagcgaaacaaaagatcagcgactgggagaagtctact
ccggggatctcgtttaatacggtgtacgatagcgcggacgaagtcagacaatcgattagc
ggattactaaaggaaggctttctcggcattattctggcttccttgatgatcttggtattt
ctgcggaatatgagaatgacgcttatcgtcatcgtgtccattccgctgtccgtcttgttg
acgctggtcgttatgaattacttgaacatcaccttaaatattatgtctctcggcggacta
ttcatcgcggtcggacggatcgtggacgatagtatcgtagtcatagagagtatctacgcg
aatctccagaaagcgcagaaaaggaacgagtcggttgttcttctggccgttaaacaagtg
gctatggcaataagctcgtctacgttcgttacggtcggcgtgttcctgccaatcgccttc
gtaaccggaattatcggagcgttattccgaccgttcgcggttacggtatccgtcgcgttg
ttggcttccttgctcgtttcgctgacggttatcccgatgatggcgaaattgatggtgctt
cgcaacgccaaggcaatgggcacgaaagagcatgagggaggcaaattggtttcgttctat
gaacgaacgttagtttggtgcctaacccatcgaatgaaaacgttgcttctttccggattg
ctgttcatcctaacgatcgtctttaccgtgcctaaccttcctaaagggtttatccctgaa
ggcccgcccgttaaacaaatgaattattcgatcaagcttccctatgaaacctccttcgac
agcaccgatctgcaggcgaaacagcttgaaacgatgttgctggaagcgaaggacgagaat
gatcggtcgatgtttactttcgtggaatcgttggtcggttacggctggtctgaagagcgc
gtcccgtacatgatcgagctgatcacgcaagtgaacgatgacgtcgaccccgatacggtc
aaggagcgttatcgcaagctgatcgcggatcaacttcctaaaggctccgaagtcatgtcc
ggatctctggccgggggaagcggttcatcatcggtcgatttcgtgtacgtgatctatggc
gaggatcagttgatgcttgaacaagcagccgcgacgatcaagaacgaaatgaaacaattt
tccgagctgaaggaaatcaaagatagcttgggggacgcgaaaacggaaattcaaatcgcg
gtttctccttccaaagcgaatctcttcggattagatgtttcgggcgttcagcgtcttgtc
gcggaatggatcgccaagtacgaattaggcaatattcgcttggataacactttattcaag
tcggctgtcgagcttgcgtcgaaggataaagattcgttggatcaattaggccgaatgccg
attcaagctgcggacggcaccatcgttcacttgaacgagatcgccaagctaggagaggtt
aaatctccgttatcgttgcaacgcgagagtcaaaggctgatggtcagcataacggcgaag
atagattcgaacgacaaagcggcgattagctcgaaagtgtcgagccagctcgaacagcta
gagcttccatccggagtatccacgacgattcgcggcgttagcctcgatatggccaaaggc
ttcacgcagatgttcgccgctatgggcgcggcaatcgcgatcgtgtatctgatcatggtg
ctgtgctttgggaacgcgggcacgccgttcgccatcttgttttccttgccgctcgcggtt
atcggcggtttgctcggattgtggatcgcgaaggaatcgatcaatattacttctctcatc
gggttccttatgctcataggcatcgtcgtcaccaatgcgatcgtcttgctcgatcgtacc
cagcaactgagaaaagaagggtatctcgcgcgtcatgcgctaatcgaatcgggcaaagtc
agactgcgtccgatcatcatgaccgccggcgctacgattgcggccatggttccgttggct
cttggactgtcgcatggcacgctcatttccaaagggcttgccgtcgtcgtcatcggaggt
ctgatcacgtccacgatattaacgttagtcgtcgttccgatcatctatgagctgatcgaa
tcgttcaaagcgagattaaaccgaatgtttaatcgtaagaacagaacgactgccggcgag
gatataagcttataa
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