Cohnella herbarum: HH215_05245
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Entry
HH215_05245 CDS
T08421
Name
(GenBank) response regulator
Organism
cheb
Cohnella herbarum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
PAS_9
PAS
dCache_1
PAS_4
PAS_8
HAMP
Hpt
HATPase_c_2
GP7
HATPase_c_3
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
QJD82652
UniProt:
A0A7Z2VGG3
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Position
complement(1228512..1232339)
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AA seq
1275 aa
AA seq
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MFRSLHLKIAIVLVLINVVSFALISLIQYETSIKQMNNQLIRHSLANLESTVANLDTLLD
LRVKQAELLSESIPQLLETTELKLAFLRDKLNQTDFSMECIGIAGQDGTMSLVDGTVQQV
ASMDAYQQALKGIGSFSPMMLDPHGKPILWLMVPLHNSSNGIVGVVGLVLDPAQLFGEQL
TLSSSDYTDSEVILIDRDTNLLYYRDTSLILKRNYMKDEPALRDFAVRLQNSEEGYGEAS
VFGRVLKMFYVKMPDNDWYAVFSVSKKEFEAPLRHAIWLNLGLTALTEIILGICLYFISR
RYILNRLKQVVLVTKNVAAGNFYPEPLRIESLDEMGMLASSVNGMIDNLQDLFEPFQAFI
RHNQYAMIVTDSQFVVTSFNKRAEEMLKYGENEIIGRKALLQWHDHDQLLARAKFYSDKL
KRTITPDEAVLFVDSHKGFIPNWEWTWINRDGVRMLVSLNTSMMRYPNGKIKGYVLIARD
ISEIKKAVETNTRLSEILESAHDMIASFDMRGSIFYLNQAGYSFLGIESLNENNNRLSQY
MPIPTTVRFADGLSEAQKLGYWQSEIEIIGANNRSQSASITVVSHQTDDGQDTFFSTIVR
DISDQKEIERQLVKAKDEADEANEAKSSFLARMSHEIRTPLNGIIGLTYLLQRTELTELQ
TDYLRQVSESSQNLLRILNDILDFSKLEADKLILEQVPFRLEETLHRLSGIFSVLLGPKP
VDFIIHLDPRIPEWIIGDPTRLEQVLLNLGANAIKFTNFGLIELMIILVRMDEGQATLHF
SVKDTGIGMTDQQREQLFMPFVQADQKTSRKFGGTGLGLVISHTLVDLMGGRITIESAIH
VGSELSFELVFPVNSQKSMPITLQPFELKVVVLEDHDRVAEHWRVLLSSFGCEVVTLCSW
DQAMLLLKERKWDLFIVDMEAEIMHGEETWMNWKSLLDEHGVQVISSTSLLGRDALQQLP
DEYKPAAVLVKPASSLHVRQALQVIRNRTMEIYDKERYAPSSLSDGSVESARSIDSYGTT
RRPRIMVVDDQVINRLVANQILVAHGFDVELIESGADALAFLEAYPSRVDLILMDLHMPD
MDGIEATTFIRRTFSAEDLPIVALTADMTKDRHVKCLNAGMNDIVTKPIKPEVLFTALGK
WLPSLPHPSIERVTQLDETWEDTPYLKVSLALQQLNGKSALYLRLLDKFLLQYSDMENSL
NALLNDKDSIGAIRLVHSLGGAAGHLGALAIQEAATKLESALLKGETPTLEKTDLLRSFN
EGVASMQQLLFLKRS
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgatcccttcacttaaagattgcgatcgtgttggtcttgataaacgtcgtttcc
ttcgctttgatctcccttatccaatacgaaacttccattaaacaaatgaataatcaactt
atccgccacagcttggcgaatctagagagtaccgtcgccaacttggatactttgctggac
ttacgggtgaaacaagcagagcttctgagcgagtctatcccccagctcttggaaaccacc
gaactcaagctagcctttctacgagataaactgaatcaaacggacttttcgatggaatgc
atcggaatcgccggccaagacggaacgatgagcctggtagatggaacggttcagcaagtt
gcctcaatggatgcctaccagcaagcgcttaaagggatcggctcattctctccaatgatg
ctggatccgcacggcaagcccatcttatggcttatggtcccgctgcataattccagcaac
ggcatcgtgggcgtcgtcggcttggtgctggatcccgcgcaattattcggagagcaatta
acgctgagctcctccgattatacggatagcgaagtcattctgatcgatcgggataccaac
cttctctactatagggatacatccttaatcttgaagcgcaattatatgaaggacgagccc
gctctgcgagacttcgcggtacgactccagaacagcgaggaaggatacggagaagccagc
gtattcggtcgcgttctcaagatgttttacgtgaaaatgccggacaatgattggtatgcc
gtattctcggtatccaaaaaagagttcgaggcacctcttcgacatgcgatatggttgaac
ttgggactcactgcgttaacggaaatcattctcggtatttgcctctattttataagccga
cgttacattcttaatcgattgaagcaagtcgtattggttacgaagaacgtcgcggcgggc
aacttttaccccgaaccgctacgtatcgaaagccttgacgagatgggtatgctggccagc
tccgtcaacggcatgatcgataatttgcaggatttattcgagcccttccaagctttcatc
cgtcacaatcaatatgctatgattgtgacggactcccaattcgtcgtgacttctttcaat
aaacgtgccgaggagatgctaaagtacggggaaaacgagatcatcggaagaaaagctctg
ctgcaatggcatgatcatgaccagttgctcgcgagagcgaagttttattcggacaagcta
aaacgtacgatcacgccggacgaagcagtgttgtttgtggattcccacaaaggctttata
cccaattgggagtggacatggatcaaccgcgacggcgtcagaatgctagtgtcgttgaat
acgagcatgatgcgatatccgaacggcaaaattaaaggttacgtactgattgcgagggat
attagcgaaattaagaaagccgtcgagacgaatacccggttatcggaaatcttggaaagc
gcgcatgatatgatcgcttctttcgatatgcgcggaagcattttctatctcaatcaggcc
ggttattccttcctgggtatcgaatccttgaacgaaaacaacaatcgcttaagtcaatat
atgcctattccgacaacggtccgattcgccgacgggttatccgaagcccagaagctcggg
tattggcaaagcgagattgaaattatcggtgctaacaaccggtctcaatctgcgtcgatc
acggttgtttcccatcagacggacgatggacaggatacgttcttctccacgatcgtccga
gacatctccgaccagaaggaaatcgagagacagctcgtcaaagccaaagatgaagcggat
gaggctaacgaagcgaagagctccttcctagcccggatgagtcatgaaatccgcaccccg
cttaacgggattatcggattaacctaccttcttcagcggacggagctaacggagcttcaa
acggattaccttcgtcaagtatccgaatcatcgcagaatctgctgcgaattctcaatgac
atcttggatttctccaaactcgaagcagacaaactcattctcgagcaagtgccgttccgt
ttagaagaaactttacatcgtctaagcggcatcttctccgttcttctcggcccgaaacct
gtcgacttcattattcatttagaccctcgaataccggaatggatcatcggcgatccgaca
cgccttgagcaggtgctattgaatttgggcgctaacgcgataaagtttacgaatttcggg
ttaatagagttaatgatcatactcgttcggatggacgaggggcaagcgactctccacttc
agcgtgaaagataccggaatcggcatgaccgatcagcaacgcgaacaattgttcatgccg
ttcgttcaagccgatcagaaaacaagccgtaaattcggcggaacggggcttggactggtc
atctcgcatactctggtcgatctgatggggggacggataacgatcgagagtgcaatccat
gtcggcagcgaattgagcttcgaactcgttttccccgtaaatagtcagaaatcgatgccg
ataacgttgcagcctttcgagcttaaagtcgtcgtgctcgaggatcatgatcgcgttgca
gagcattggcgcgttctactctcatcgttcggatgcgaagttgtaactctctgcagttgg
gaccaagcgatgctcttgttgaaggaacggaaatgggatttgttcatcgtcgatatggaa
gcggaaatcatgcatggagaagaaacttggatgaactggaagtctctattggatgagcac
ggcgtccaagtcatttcgtctacgagtttgcttggtagagacgcattgcagcaattgccc
gacgaatacaaacccgctgccgtattggttaaaccggcttcgtcattacacgttcggcaa
gcgctgcaagtgatacgcaatcgaacaatggaaatctacgacaaggaacggtacgcccca
tcttccctatcggatggatcggtggaatccgcccgctcgatcgactcttatgggacaact
cgcagaccgcgcattatggtcgtagacgatcaagtgattaatcgattggtcgctaatcaa
atcttggtggcgcatgggttcgatgtggaactgatcgagagcggcgccgatgctttggct
ttccttgaggcgtatccgtcgcgagtggatctcatcttgatggatcttcacatgccggat
atggacggcattgaagcaacgacatttattcgcagaacattcagcgcggaagatcttcct
atcgttgcgttaactgccgacatgacgaaagatcggcatgtgaaatgcttaaacgcggga
atgaacgatatcgttacgaaaccgattaaaccggaggtcctgttcacggctcttggcaaa
tggcttccttccctccctcatccatctatcgaacgcgttacgcaactcgacgaaacctgg
gaagacacgccttatcttaaggtatcgcttgccttgcagcaattaaacggcaagagtgcc
ttgtatttaagactactggacaaattccttctccagtattcggacatggaaaatagtctt
aacgctttgctgaacgataaggatagcataggtgcaatccgtctcgttcattctttagga
ggggccgcgggtcacctcggagcgctggccattcaagaagcggcaacgaaattggaaagc
gctctcttaaaaggggaaaccccgacattggaaaagaccgatctcctaaggtcgtttaat
gagggagtagcctctatgcagcaactcttgttcctaaaaaggagttag
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