Cohnella herbarum: HH215_07215
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Entry
HH215_07215 CDS
T08421
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HH215_07215 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_07215 (lsa)
01504 Antimicrobial resistance genes [BR:
cheb01504
]
HH215_07215 (lsa)
Transporters [BR:
cheb02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HH215_07215 (lsa)
Antimicrobial resistance genes [BR:
cheb01504
]
Gene variants
Macrolide resistance genes
Transporters
HH215_07215 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
YobI-ATPase
MMR_HSR1
Dynamin_N
NB-ARC
RsgA_GTPase
Leu_zip
TseB
DUF4024
Motif
Other DBs
NCBI-ProteinID:
QJD82984
UniProt:
A0A7Z2ZKP2
LinkDB
All DBs
Position
complement(1649636..1651114)
Genome browser
AA seq
492 aa
AA seq
DB search
MSLINVANLTFAYEGSYDNLFEKVNFQLDTDWKLGFTGRNGRGKTTFLRLLLGDYEYGGK
ISANVGFEYFPFHVEHMEDHTIDVINGIVPDVPLWEIMRELTLLKVSEDVLYRPFDSLSN
GEQTKVLLAALFLKENSFLLIDEPTNHLDIEARKLVGHYLNAKSGYILVSHDRSFLDRCV
DHILSINKTNIEIRKGNFSDWWENKRRQDHFELAENEKLRKDIRRLSESAKRTSNWSDAV
EKTKFGTLNSGSDVDRGYIGHKAAKMMKRSKSIEHRQQSAIEDKSKLLKNIESAESLKLS
QLAYHKNQLAELDHVSIYYGEKQVCSDIGFMIEQGDRIALTGRNGSGKSSVIKLILGEKI
DYSGTFRKGSQLKISYVSQITSHLRGNLTDYARDNGIDESLFKSILRKLDFSRVQFEKDM
SDFSGGQKKKVLIAKSLCEKAHLHIWDEPLNFIDVISRMQIEELLLEYKPTLLFVEHDSE
FCENIATKIVKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaattaatgtcgcgaacttaacgtttgcctatgagggcagctacgataatttg
ttcgaaaaagttaattttcaattggacaccgattggaaattaggatttacgggaagaaac
ggaagggggaaaaccacattcctccgcttattgcttggtgattatgaatacggcgggaag
atttccgctaatgtcgggttcgaatatttcccattccatgtcgaacacatggaagatcat
acgattgatgtcatcaacggcattgtcccggacgtccctctctgggaaatcatgcgcgaa
ttgacgttgcttaaggtttccgaagatgtcttatatcgcccgttcgactctttgtccaac
ggagaacagaccaaggtactattagcagccttatttcttaaggaaaacagttttctgtta
atcgatgaaccgaccaatcatcttgacattgaggcaagaaaactcgtcggtcattatctc
aacgccaaaagcggatacatcctcgtgtctcacgacagatcgtttcttgatcgctgcgta
gatcacattttatccatcaataagactaacatcgaaatccggaagggtaatttctccgat
tggtgggaaaataaaaggagacaggatcacttcgagctagcggagaacgaaaagctcaga
aaagacattagacgtctatcggaatccgcgaaacgaacgagcaattggtcagatgcagtg
gaaaagacgaaattcggaaccttaaattccggatccgacgtagatagagggtatatcggc
cacaaagccgctaaaatgatgaaacgctcgaaatcgatcgagcatagacagcaatccgcg
atagaagacaagtctaagctgcttaagaatattgaaagcgccgagagcttaaagctttca
cagcttgcctatcataaaaatcaacttgccgaactcgatcatgtttccatttattacggc
gagaagcaggtatgttcggatatcggttttatgattgagcaaggggatagaatagcgctt
acgggtaggaacggttcgggaaaatcgagcgtcataaaacttattctgggcgagaaaatc
gattattccggtactttcaggaagggcagccaacttaaaatatcctatgtctcacagatt
acttcgcatctgcggggcaatttgacggactacgcgagagataacgggattgacgaaagt
ctgttcaaatcgatcttaaggaaactcgatttttcgagggtgcaattcgagaaggatatg
tcggattttagcggtgggcagaaaaagaaagtattaatcgcaaaaagcctttgcgagaaa
gcccatttgcatatttgggatgaaccgctaaattttatcgatgtcatctcacgcatgcaa
attgaagagttgctgcttgaatataagccaaccttgctttttgttgagcatgacagcgaa
ttttgcgaaaatattgcgaccaagatcgttaagctctaa
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