Cohnella herbarum: HH215_09005
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Entry
HH215_09005 CDS
T08421
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cheb03016
]
HH215_09005 (miaB)
Enzymes [BR:
cheb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HH215_09005 (miaB)
Transfer RNA biogenesis [BR:
cheb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HH215_09005 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QJD83296
UniProt:
A0A7Z2VHU2
LinkDB
All DBs
Position
complement(2013193..2014758)
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AA seq
521 aa
AA seq
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MAKETKDFSKYFDFSGAKVISEDQSGKTIRLNGRDIHIVSEPDYRQEKQRGKEEIQVHYE
NAVPDELKHLGVGKKYLIQTYGCQMNEHDTEVMRGLFEEMGYEQTDVRVEADVILLNTCA
VRENAEDKVFGELGHLKVLKQQRPELILGVCGCMSQEASVVTRIMQKHAHVDMIFGTHNI
HRLPMLLQEAHFGKEMVIDVWSKEGDIIENLPKKRTEGLRAWVNIMYGCDKFCTYCIVPY
TRGKERSRLPEDVIAEVRDLARQGFKEITLLGQNVNAYGKDFTDRSYRFGDLMDDIRKVD
IPRVRFTTSHPRDFDDHLIEVMAKGGNLVEHIHLPVQSGSTEILKRMSRKYSRERYLELA
QRIRKEIPNAVLTTDVIVGFPGETEEQFEDTMSLMREAGITSAYTYIYSPREGTPAFDMA
DDVPLEVKQKRLARLNELIGHLSLEHHQGLVGQVIEVLVEGESKNKANVLSGRSRSNKLI
HFEGDKEWIGKFLQVKVTAAQSWYVKAEAVSEPVAAVSYAG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaacgaaggattttagcaaatatttcgatttctcaggtgccaaagtcatt
tccgaggaccaaagcggcaaaacgatccgtctgaacggacgggatatccatatcgtctcc
gagccggactaccggcaggagaagcaacggggcaaagaagaaattcaagtccactatgag
aatgccgttccggacgagctgaagcaccttggcgttgggaaaaagtatttaatacagact
tacggttgccagatgaacgagcacgataccgaggttatgcggggtttgttcgaagaaatg
ggttacgagcagacggacgtccgcgttgaagcggatgttattctgctgaatacgtgcgcc
gtgcgagagaatgcggaagataaagtattcggagagctcggccatctgaaagtgctgaag
cagcaacgtccggagctaattctcggcgtatgcgggtgcatgtcccaggaagcttccgtc
gttacccggatcatgcagaagcatgctcacgtggatatgatcttcggtacgcacaacatc
catcgtctgcctatgctgctgcaggaagcccatttcggcaaagaaatggtcatcgacgtg
tggtccaaagaaggcgacattatcgaaaaccttccgaagaagcgcaccgaagggctgcga
gcttgggtgaatatcatgtacggctgcgataaattttgcacgtattgcatcgttccgtat
acgagaggcaaggaacgaagccggttaccggaagacgtgatcgcggaagtgcgcgatctc
gctcgccaaggcttcaaggagataacgttgctcggacagaacgtgaacgcttacgggaaa
gatttcacggatcgatcctaccgcttcggggatttgatggacgatattcgcaaggtggac
attcctcgcgtccgatttacgacttcccatccgagagatttcgacgatcatctgatcgag
gtcatggccaagggcggaaatcttgtggagcatattcacttgcccgttcaatcgggcagc
acggaaattctgaaacggatgagccgcaagtattcccgggagcgttatctggagctcgcg
cagcgaattcgcaaggaaattccgaatgcggtacttacgacggacgttatcgtcggattt
cccggcgagacggaagagcaattcgaggatacgatgagcttgatgcgggaagcgggaatc
acatccgcctatacgtatatttattctccgcgggaaggtacgcctgcgttcgatatggcc
gatgacgttccgcttgaagtgaagcagaagagactggcccgattaaacgaattaatcgga
catttgtcgctcgagcatcaccaagggttagtcggacaagtgatcgaggtgctcgtcgaa
ggggaaagcaaaaataaggccaacgtattgtccggtcgcagccgctcgaacaaactcatt
catttcgaaggcgacaaggaatggatcgggaagttcctgcaagtaaaagtaacggcggcg
caatcgtggtacgttaaagccgaagccgtcagcgagccggtagcggctgtgagctacgcg
ggataa
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