Cohnella herbarum: HH215_09185
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Entry
HH215_09185 CDS
T08421
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cheb03016
]
HH215_09185 (truB)
Enzymes [BR:
cheb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HH215_09185 (truB)
Transfer RNA biogenesis [BR:
cheb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH215_09185 (truB)
Prokaryotic type
HH215_09185 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QJD83330
UniProt:
A0A7Z2ZKY5
LinkDB
All DBs
Position
complement(2055508..2056449)
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AA seq
313 aa
AA seq
DB search
MKQQAEQNWDGVLAIWKPAGWTSHDVVAKARGLLRVRRIGHTGTLDPAVTGVLPLCVGRS
TRFVEYLQEMPKTYVAKLRFGIATNTEDLSGEVIEQKDASFLTEPMMVEAALSFVGEIDQ
IPPMVSAVKVNGQRLYDLARQGITVERASRRVTIQEIHILKVVDGVDQPELTFSVTCSKG
TYIRTLCVDIGRKLGVPAVMAELVRTESAGIKQEQCVTLEQIPELIKQGELGDKLLAGDS
MLTAIPSSSVAYPESLYALQGKRIEAARLQPPPDSTGLIKLYRSDGAFLGLFFVDENRET
VRPIKVFYASDDS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacaggcagaacagaattgggatggcgtgctggccatttggaagcccgcgggc
tggacctcccacgatgtagtggcgaaagcgcgcggtttgcttcgggtacggaggatcgga
catacgggtacgctagatccggctgtaacgggcgtacttcccttatgtgtcgggcgttcg
acccgtttcgtagagtacttgcaagagatgcccaagacgtatgttgcaaagctaagattc
ggtattgcaacgaatacggaagatctaagcggcgaagtgatcgagcagaaggacgcgtcg
tttctgacggagcctatgatggtggaagccgccttatctttcgttggcgaaatcgatcaa
attccgccaatggtatcggcggtcaaggtcaacggtcaacggttatacgacttggcgcgg
caggggatcacggtagaacgcgcttccagacgggtaacgattcaggagattcatatactc
aaagtcgttgacggagtcgaccagccggagctgactttttccgttacgtgctccaaaggc
acctacattcgtacgttatgcgtggatattggccgcaagttgggcgttccggctgtcatg
gctgaacttgttcgtacggaaagtgccggtatcaaacaagagcagtgcgtgacgttagag
cagattccggagctgattaagcaaggggaactgggagataagctgctagctggcgattcg
atgctaacggcaatcccttcgtcatcggtagcttacccggaatcgttatatgcattgcag
ggcaagaggattgaagccgcaagacttcaaccccctcccgacagcactggattaataaaa
ctttaccgatcggacggtgcctttctcggattattcttcgttgacgagaatagagaaaca
gtccgcccgattaaggtgttttacgcttcggatgacagttaa
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