Cohnella herbarum: HH215_09635
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Entry
HH215_09635 CDS
T08421
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cheb
Cohnella herbarum
Pathway
cheb02024
Quorum sensing
cheb03060
Protein export
cheb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HH215_09635 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HH215_09635 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HH215_09635 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cheb02044
]
HH215_09635 (ffh)
Enzymes [BR:
cheb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HH215_09635 (ffh)
Secretion system [BR:
cheb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HH215_09635 (ffh)
Eukaryotic Sec-SRP protein
HH215_09635 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
APS_kinase
cobW
AAA_17
CbiA
TsaE
AAA_22
AAA_30
nSTAND3
MMR_HSR1
AAA_18
ATP_bind_1
AAA_33
6PF2K
Thymidylate_kin
NPHP3_N
AAA_31
AAA_16
Arf
NTPase_1
NACHT
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QJD83414
UniProt:
A0A7Z2VIC2
LinkDB
All DBs
Position
complement(2146307..2147683)
Genome browser
AA seq
458 aa
AA seq
DB search
MAFEGLSTRLQNVFGKLKGRGKVSEDDVNEAMREVRLALLEADVNFKVVKDFIAKVKERA
TGQEVVKSFTPAMVIIDIVNKELTELMGGTQEKLAKANKPPTVILMAGLQGAGKTTLTGK
LAKLLQSQNHKPLLVAGDIYRPAAIKQLEVLGGQIGAPVFTLGDQVSPVEIAKQGVQLAK
EQGNDYVLIDTAGRLQIDAELMQEIKDIHAAVNPDEVLLVVDAMTGQEAVNVAQSFHEQL
ALTGVVLTKLDGDTRGGAALSVKAVTGCPIKFASTGEKIDQLEAFHPDRMASRILGMGDM
LSLIEKAQTNMDAEKAKEMERKMRTADFTFDDFLEQMEQVRKMGPLDQLLDMMPGMGKLK
GNPNFKIDEKQIARTEAIAKSMTKAEKKKPDIINYSRRKRIAAGSGTTLADVNRLLKQFE
DMKKMMKQFSGMMGPKGPKGGLKGLKNMLGGKNMKFPF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgaaggattatcgacccggctgcagaacgtattcggcaagctgaagggccgc
ggcaaagtttcggaggacgacgttaacgaagcgatgcgcgaagtgcgcctagccctgctt
gaagcggacgtaaactttaaggtcgtcaaggatttcatcgcgaaggtgaaagagagagcc
accggtcaagaagtggtgaaaagctttacgcccgcgatggtcatcatcgacatcgttaac
aaagaactaaccgaactgatgggcggtacccaggagaagctcgcgaaagcgaacaaaccg
cctaccgtcattctcatggccggtttgcaaggtgccggtaagacgacgttgacgggcaag
ctcgcgaagctgttgcaatcccagaatcacaagccgcttctagtcgcgggcgatatttac
cgccctgccgccattaaacagctggaagtgctcggcggccaaatcggagctccggtattc
acgctcggcgatcaagtcagtcccgtcgaaatcgcgaaacaaggcgttcagttggctaag
gagcaaggcaacgattacgtgctgatcgatacggccggccgattgcagatcgatgccgag
ctgatgcaagagatcaaggacattcatgccgcggtcaatcccgacgaagtattgctcgtc
gtcgacgcgatgaccggacaagaagccgttaacgtcgcgcaaagctttcacgagcaactc
gctctgaccggggtcgttctgacgaagctagacggcgatactcgcggtggagccgcattg
tcggtcaaagccgtgacgggatgcccgattaaattcgcttccacgggcgagaagatcgat
cagcttgaagcgttccatccggatcggatggcttcccgaattctcggcatgggcgacatg
ctctccctgatcgagaaggcgcagacgaacatggacgcggagaaggctaaggaaatggag
cgcaaaatgcgcaccgcggactttaccttcgacgatttccttgaacagatggagcaggtt
cgcaagatgggacctctggatcagcttcttgatatgatgcccggaatgggcaagcttaaa
gggaatccgaacttcaaaatcgacgaaaagcaaatcgcgcgcacggaagcgatcgccaaa
tcgatgacgaaggcggagaagaaaaagcccgacatcattaattacagccgtcgcaaacgg
atcgccgccggtagcggaacgacgttggccgacgtcaaccgtcttctgaagcaattcgag
gacatgaagaaaatgatgaaacagttttcaggcatgatgggtcccaaaggccctaaaggc
ggtctcaaagggctcaaaaacatgctcggcggcaaaaatatgaagtttccgttttaa
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