Cohnella herbarum: HH215_09920
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Entry
HH215_09920 CDS
T08421
Symbol
rlmN
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cheb03009
]
HH215_09920 (rlmN)
Enzymes [BR:
cheb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
HH215_09920 (rlmN)
Ribosome biogenesis [BR:
cheb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HH215_09920 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Fer4_12
Radical_SAM_2
MazG
E3_UbLigase_EDD
Motif
Other DBs
NCBI-ProteinID:
QJD88076
UniProt:
A0A7Z2VR97
LinkDB
All DBs
Position
complement(2202997..2204094)
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AA seq
365 aa
AA seq
DB search
MEQKVRKENKEQNDAEQNKPFIYDLSLEDIQEWIKAQGEPAFRAGQIFDWIYVKRVGSFE
EMLNLSKPLREKLAANFRFITLTEIAKFESKDGTVKFLFGLHDDHAIETVIMRHNYGNSV
CVTTQVGCRIGCTFCASTLGGLKRSLTAGEIIAQVVQSQRILDPLNERVSSIVIMGIGEP
FENYDATMQFLRTMIHPKGLNIGARHITVSTSGIVPSMIKFADENTQINLAISIHAPNDA
LRSKLMPVNRRFPFVDVINACKYYIEKTGRRITFEYALIGGVNDRPEHAEELGDVLQGML
CHVNLIPVNYVPERNYVRTPRDDIFEFQRVLQKKNVNVTIRREQGHDIAAACGQLRAKHM
ETTTG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaagtacgcaaggaaaataaagaacaaaacgacgcggaacaaaacaaacct
tttatctacgatttatctttggaagatattcaagagtggattaaagcgcagggggagccg
gcttttcgcgcgggtcaaattttcgattggatctacgttaagcgcgtaggctccttcgaa
gaaatgttgaatttatctaagccccttagagagaagctggccgctaacttccggtttatc
acgctaacggagatcgcgaagttcgaatccaaggacggaacggtgaagttcctattcggc
ttgcacgacgaccatgcgatcgaaacggtcattatgcgccataactacggcaatagcgtc
tgcgtgacgacgcaggtcggctgcaggatcggctgcacgttctgcgcttctactctaggc
ggtcttaagagaagcttaaccgcaggggaaatcattgcccaggtcgttcaatcgcaaaga
atattagaccctcttaacgagcgggtttccagtatcgtcatcatgggcatcggcgagcct
ttcgaaaattacgatgcgacgatgcagtttctacgcacgatgattcatcctaaagggctg
aacatcggggccagacacattaccgtatcgacaagcggaatcgtgccaagcatgatcaag
ttcgccgacgagaatacgcaaatcaacttggcgatttccatccatgcgcctaacgacgcg
cttcgttcgaagcttatgccggttaatcggcggttccctttcgtggacgtcattaacgct
tgcaaatattacatcgagaaaacgggtcggcggattacgttcgaatatgctttgatcggc
ggagtcaacgatcgtccggagcatgcggaagaactaggcgacgtgcttcagggcatgttg
tgccacgtgaacctgattcccgttaactatgtgcccgaacggaattacgtgagaacgccg
cgggacgatatttttgaattccagcgcgtgttgcagaagaaaaacgttaacgttacgatt
cgcagggagcaaggccatgacattgctgcggcttgcggtcaattgcgggcgaagcacatg
gagacgacgacggggtga
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