Cohnella herbarum: HH215_11025
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Entry
HH215_11025 CDS
T08421
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cheb03400
]
HH215_11025 (addB)
Enzymes [BR:
cheb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH215_11025 (addB)
DNA repair and recombination proteins [BR:
cheb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HH215_11025 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QJD83656
UniProt:
A0A7Z2VIK7
LinkDB
All DBs
Position
complement(2435571..2439107)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSLRLITGRSGSGKTQLILNEIRSKLQSDPLGTPLILLVPEQATFQMEYAMVTTPGLPGF
LRAQVLSFRRLAFRVMQETGGSAVVPIHDNGKAMLLHKVLEARRESLRLFRGGKTESGLI
TRINDLLTEMKRYGIGSDKLSKQATATAERVAATKESALLADKLHDLSMIYTDMEQQLVG
HWLDGEDMLGWLARGAAGSTFLNGAEIWLDGFHGFTPSEYAVIEALLRKADKVSVNLCLD
RPYHATERPDELDLFHPTAETSAQLCELAQASGVHMEPPVVLDPEVSPRFRNNPMLAFLE
RNWGNRKKWTGESAFLAPEHPGCGLHLYAAANRRAEAEAVARDMLYRVRENGNRWRDMAL
FVRKMDDYADLLATVFGDYGIPYYLDGKASVSHHPLVEFVRSALECVAGGWKAEAVFRCA
KTDLLGTPDRRVSRDEIDRLENYALAAGIDGWRWHSAQAWFPLFRGDLEDETSIMDAEEA
MRGLLDVRDALLKSLLALEEGMKSAKTIRELCESLYGFLEQTGAADMLEQWSREDGATGK
PGRMAVHRPLWDGMINLLDQLVELMGDNSADIQLFAGMVDSGLEELKLGAVPPSLDGVLI
GSPERTRSDRVRIVYLLGANDGVLPMRISENGLFAEEERDRLAVTGLSLAPGARRRLLDE
AFLAYLTFTTASQHLWVSYPQADDEGQGLLPSEWIGKLRSRFPGIPIRSVAAEPLETQTE
AEQLEYAAHPGRALTHLLTRLRGWRQGERISAGWWSVYDWLRDREDWNVRLSSLVASLNY
SNVEEPLTPETSRLLYGDRLLASVSRMERFIACPFQHFAVHGLRLQERRLFKVDSPDIGQ
LFHAALRQTTEKLFAEGPAGMDAMRWQIEAAAAVDKLLPRVQSQILLSSHRHQVMARKLR
DIVTQASAILGEHAALSAFKPVGLEMSFGPKGLLPALSLQLDGGRWMDIAGKIDRVDAAQ
SSSGLLLRIMDYKSSAMKLKLDEVAHGLSLQMLTYLDVVVSHAPHWLGQAAKPAGVLYFH
VQNPLLLTPNGMPKEEARNALFRQYRMQGLLLSDGESVKLMDESLNQNSKSAVVPVEFKK
DGAFSARSQVANESEWEVLRGSVRSQIRRIGKRIVDGDVAITPYRMDKRSPCTFCDFRPV
CHFDSQVEGNAYQALSKAGSKEELWQRLANGAQGSESN
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcggctaataacgggtcgttcgggtagcggaaagacgcagctgatattgaat
gagatacggagtaagctgcagagcgatccgttgggaactccgctaatattgctcgtgccg
gagcaagcgactttccagatggaatacgcgatggtgacgacgccgggattacccgggttt
cttcgggcccaagtactcagtttccgcaggctcgcctttcgggtgatgcaggaaacgggc
ggctcagccgtcgttccgatacacgataacggtaaagcgatgcttttacataaggtgctg
gaagcccgcagggaaagcttaagattgtttcgcggagggaaaaccgaatcgggcttaatt
acgcgaatcaacgacttgttgacggaaatgaaaagatacggaatcggcagcgataaatta
tcgaagcaagcgacggcgacggccgaacgggtagcggcgacgaaagagtcggctctgcta
gcggacaagcttcacgatctgtcaatgatctataccgacatggagcaacaattggtcggt
cattggttggacggagaggacatgctgggttggcttgcgaggggcgccgcgggatcgact
ttcctcaatggcgcggaaatttggctagacggatttcatggctttacgccgagcgagtac
gcggttatcgaagctctattgcgaaaagcggataaggttagcgttaacctgtgcctagat
cggccttatcacgccacagaaaggccggacgagcttgatctgttccatcctacggcggag
acgtcggcgcaattgtgcgagctggcgcaggcgtccggcgtgcatatggagccgccggtc
gtccttgatcctgaagtctcgccgcgttttcggaacaacccgatgcttgctttcttggaa
cggaattggggaaatcgcaagaagtggacgggagaatccgcgttcttggcgccggagcat
cccggctgcgggttacatctttacgcggcggccaaccgcagggcggaagccgaagccgtt
gcccgggacatgctgtatcgggtgagagaaaatgggaaccggtggagagatatggctcta
ttcgtccgtaaaatggacgattacgcggatttattagccaccgtattcggcgactatggc
attccgtattatttggacggcaaggcatccgtatcccaccatcctctagtagaattcgtg
cgttccgcgctcgaatgcgtcgccggcggatggaaagccgaagccgtatttcgctgcgcc
aagacggatttgctgggaacgcctgaccgacgcgtctcgcgggacgaaatcgaccgcttg
gagaactacgcgctggccgcgggaatcgacggctggcgctggcattcggcacaagcctgg
ttcccgttgttcaggggagatctagaggatgaaacatccattatggatgccgaggaagcg
atgcgaggattgctcgacgtaagggatgcgctgctgaagtcgttattggcgctagaagaa
ggtatgaagtccgcaaaaacgatcagagagctgtgcgagagcttatacgggtttttagag
caaaccggagcggcggacatgttggaacaatggagcagagaggacggagcgacggggaaa
ccgggtcgcatggccgttcatcgcccgttatgggatggaatgatcaatctgctagatcaa
ttggtagagttgatgggggataactccgcggatattcaattgttcgcgggtatggtggat
tcaggcttagaagaattaaagctgggagcggttccgccgtcgcttgacggcgtcttgatc
ggcagcccggagagaacccgatccgatcgcgttcggatcgtctatttgctcggcgcgaac
gacggggtgcttccgatgcggatatccgagaacggcttgttcgcggaagaggaacgcgac
agattagccgtcacgggtttatcgctagcgccgggagcgcgcagaaggctattggacgag
gcgtttttggcctatttgacgtttacgaccgcttcccagcatctatgggttagttatccg
caagcagacgatgaaggccaaggtttgcttccgtcggagtggatcggcaagctgaggagc
cggtttccgggcattccgattcgctcggtcgccgcggagccgctggaaacgcaaacggaa
gcggagcagttggagtacgcggctcatccgggaagggctttgacccatttgttgacgaga
cttcgcggctggcggcagggagaaagaatttccgcgggctggtggtcggtatacgattgg
ttaagggatcgggaagattggaacgtgaggctttcctccctggtcgcctcgttgaattac
tcgaacgtggaggagccgctgactccggagacgagccgattgctgtacggggatcgtcta
ttggcgagcgtgtcgcggatggagcggttcatcgcttgtccgttccaacatttcgccgta
catggcttgcggctgcaagaacggcgcttgttcaaggtggattcgcccgacatcgggcaa
ttgttccatgcggcgctacgccagacgaccgagaagctgttcgcggaaggaccggccggg
atggatgccatgcgttggcagatcgaagcggccgccgcggtggacaagctactgcctcgc
gttcaatcgcaaatcttattatcttcccaccgtcatcaggtgatggcgcgcaagcttcgg
gatatcgtaacgcaagcttcggccatcctgggagagcatgccgcgttatcggctttcaag
cccgtcggactcgagatgagcttcgggcctaaaggcttgttgccggcgctttcgctgcaa
ttggacggcggacgctggatggacatcgccggaaaaatcgaccgcgtcgacgcggctcaa
tcctcgtccgggttgctccttcgcatcatggactataaatctagcgctatgaagcttaag
ttggacgaggtggcgcacggactttcgcttcagatgcttacttatttggacgtcgtcgtt
tcccatgcgcctcattggctcggacaagcggccaaaccggcgggcgtgctttatttccat
gtgcagaatcctctgttgcttacgccgaacggaatgcccaaagaggaggctcgcaacgcc
ttattccgtcaataccgcatgcaaggcttgctgttgtccgacggagaatcggtcaagctt
atggacgaatcgttgaatcagaacagcaaatcggcggttgttcccgtcgaattcaagaag
gacggcgcgttctccgcgcgatcccaagtcgccaacgaaagcgaatgggaagtgctgcgg
ggatcggttcgttctcagatccgccgtatcggcaaacggatagtcgacggtgacgtggcg
attaccccgtaccggatggacaagcgcagcccgtgcacgttttgcgatttccggccggtg
tgccatttcgatagccaagtagaaggcaatgcgtatcaggctttaagcaaagccggcagc
aaggaagagttatggcagcggctggccaacggcgcgcaagggagtgaatcgaattga
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