Cohnella herbarum: HH215_11180
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Entry
HH215_11180 CDS
T08421
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
cheb
Cohnella herbarum
Pathway
cheb00240
Pyrimidine metabolism
cheb01100
Metabolic pathways
cheb01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HH215_11180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cheb02044
]
HH215_11180
Enzymes [BR:
cheb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
HH215_11180
Secretion system [BR:
cheb02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
HH215_11180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
OTT_1508_deam
DUF5796
SNAD4
APOBEC_N
DUF4941
APOBEC4_like
Motif
Other DBs
NCBI-ProteinID:
QJD83684
UniProt:
A0A7Z2VIV8
LinkDB
All DBs
Position
complement(2471469..2471987)
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AA seq
172 aa
AA seq
DB search
MTGLRKDWDTYFMDIAFMVSTRSRCPRRHVGTVLVQGKKLLGTAYNGAPMGVQDCSEAGC
MIVEEFESAPEGAPSTEMIKKQRCIRTIHAEQNLLLFTDRVDREGSVVYVTDQPCWTCAN
MLANSGIAEIVYYRPYLKDHGKVAALMEQRGLLFRQIGSYVPPADTEVQDGS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcctacgtaaggactgggacacgtatttcatggatatcgcttttatggtttcg
acccggtcgcgctgtccaaggcgtcacgtaggtacggtgctcgtacaagggaagaagttg
ttaggcacggcttacaacggagctccgatgggcgttcaagattgctccgaagcaggttgt
atgatcgtggaggaattcgaatccgctcccgaaggcgcgccatcgactgaaatgatcaag
aagcagcgctgcatcaggacgatccatgcggagcagaatcttctgttgttcacggatcgc
gtggaccgcgaaggatccgtcgtgtacgtaacggaccagccttgctggacttgcgcgaat
atgctggcgaacagcggcatcgcggagatcgtttattaccggccttacctgaaggatcat
ggaaaagtagccgcgctaatggaacaacgaggtttgctcttccggcaaatcgggagttac
gttcctccggcggatacggaagtacaagacggatcgtag
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