Cohnella herbarum: HH215_12530
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Entry
HH215_12530 CDS
T08421
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cheb
Cohnella herbarum
Pathway
cheb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HH215_12530 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cheb03400
]
HH215_12530 (mutM)
Enzymes [BR:
cheb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HH215_12530 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HH215_12530 (mutM)
DNA repair and recombination proteins [BR:
cheb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HH215_12530 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
HVO_2718
DDT
Motif
Other DBs
NCBI-ProteinID:
QJD83926
UniProt:
A0A7Z2VJ37
LinkDB
All DBs
Position
complement(2800893..2801813)
Genome browser
AA seq
306 aa
AA seq
DB search
MPELPEVETVRRTLNELIVGKTIDRVTVNLPRIIQKPDDTQLFAALLEGRTFQSVERRGK
FLRLLLDGIVLVSHLRMEGRYGLFGKEEPTEIHTHVIFHFTDGTELRYKDVRQFGTMHLF
QPGEELQARPLNKLGLEPLEEGFTLETFQRALGKRSTKIKPLLLNQEVIVGLGNIYVDEA
LHTAGIHPERQWNELTKKERELLHLAIVETLSAAVEAGGSSIKSYVNGQGEMGLFQHSLK
VYGRNGDCCHTCGTLIEKSVVGGRGTHVCPKCQKQPRNVNRSRTTSSIESRNAVKHRLDG
KSSKDS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccggaggttgaaaccgtccgccggactttaaatgagcttatcgtcggg
aagacaatcgaccgcgttaccgtgaacttaccccgcatcattcagaaaccggacgacacg
caactgtttgctgccctattggaaggaagaacgtttcaatccgtcgagcgaagggggaag
tttctgagactcctcctcgatggaatcgtgcttgtttcccatcttcggatggagggacgt
tatggtttgttcgggaaagaagagccgacggaaatccatacccacgtcattttccatttc
acggacggaaccgaattgcgatataaggatgttcgccaattcggaacgatgcatcttttt
cagcccggagaagaattacaagcccgcccgttgaataaactgggattggagcctctggaa
gaagggttcacgttggagacgttccagcgtgcgctcggtaaacggtcgacgaagatcaaa
ccgttgctgcttaatcaagaggtcattgtcggattaggcaacatctacgtggatgaggcg
ctgcataccgcgggcattcacccggagaggcaatggaacgagctgacgaagaaagaacgg
gagcttctacacctcgcgatcgtggagactttgtcggctgccgtagaagccggaggctcc
tccatcaaatcctacgtgaacggccaaggagagatggggctgttccagcatagcttgaag
gtgtatggaaggaacggcgattgttgccatacttgcggtacgctaatcgaaaagtcggtt
gtcggaggccggggtacgcacgtatgtcctaagtgccagaaacagcctcgcaacgtaaac
cggtcccggacgacctcgtcgatcgagtcgcgcaatgcggttaaacatcgattggatggt
aaaagtagtaaggatagttag
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