Cohnella herbarum: HH215_13600
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Entry
HH215_13600 CDS
T08421
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
cheb
Cohnella herbarum
Pathway
cheb00020
Citrate cycle (TCA cycle)
cheb00190
Oxidative phosphorylation
cheb00650
Butanoate metabolism
cheb00720
Other carbon fixation pathways
cheb01100
Metabolic pathways
cheb01110
Biosynthesis of secondary metabolites
cheb01120
Microbial metabolism in diverse environments
cheb01200
Carbon metabolism
Module
cheb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cheb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HH215_13600 (sdhB)
00650 Butanoate metabolism
HH215_13600 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HH215_13600 (sdhB)
00720 Other carbon fixation pathways
HH215_13600 (sdhB)
Enzymes [BR:
cheb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HH215_13600 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_16
Fer4_2
Fer4
Fer4_4
Fer4_13
Fer4_21
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QJD84123
UniProt:
A0A7Z2VIZ3
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Position
complement(3077881..3078666)
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AA seq
261 aa
AA seq
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MAEATTATKATTATGRKVKFIITRRERPDASPFTEEFEVPYRPNMNVISALMEIQRNPVK
SNGEKTAPVCWESNCLEEVCGACSMVINGKPRQACSSLIDKLEQPIRLEPMATFPVVRDL
VINRERMFNALKKVKAWIPIDGTYDLGPGPRMAESKRQWAYELSKCMTCGVCLEACPNVN
DRNSFIGPASISQVRLFNAHPTGEMNAHERLDALMEEGGIEGCGNSQNCVRSCPKGIPLT
TSIAAMNRDTTKQLFKQWLGM
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctactactgcaacgaaagcgaccacggctacgggtcgtaaagtcaagttc
atcattacgcgacgggaacgtccggatgcctccccattcacggaggaattcgaagttccg
taccgcccgaatatgaacgtcattagcgcgttgatggaaattcagcgcaatcccgttaaa
tccaacggagagaaaaccgctccggtctgctgggaatccaactgtctggaagaagtgtgc
ggagcttgctcgatggtcatcaacggcaagccgcgccaagcgtgcagctcgctcatcgat
aagctggagcagccgattcgcttggagccgatggcgactttccctgtcgtaagggatttg
gtcatcaaccgcgaacggatgttcaacgcgcttaagaaggttaaagcttggattccgatc
gacggtacgtacgatcttggaccgggtcctcgcatggccgaatcgaaacgccaatgggct
tacgagctgtccaagtgcatgacttgcggcgtttgcctcgaggcttgcccgaacgtcaac
gataggaacagcttcatcggcccggcgtcgatctcgcaagttcgcttgttcaacgcccat
ccaacgggcgaaatgaacgctcacgagcgtcttgacgcgctgatggaagaaggcggcatc
gaaggctgcggtaactcgcagaactgcgttcgctcctgtccgaaaggcatcccgctaacg
acttccatcgcggcgatgaacagagacacgaccaagcaactgttcaagcaatggcttggc
atgtaa
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