Cohnella herbarum: HH215_14170
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Entry
HH215_14170 CDS
T08421
Name
(GenBank) DUF3502 domain-containing protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HH215_14170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_14170
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
HH215_14170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
LPAM_2
Motif
Other DBs
NCBI-ProteinID:
QJD84221
UniProt:
A0A7Z2VJ64
LinkDB
All DBs
Position
complement(3194418..3196055)
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AA seq
545 aa
AA seq
DB search
MVKSKMSFTLISAIIVFTLVLAGCGNNKNNDQAKESSAAPSASTSSEASAPASAPASESA
SPDNAIDTSEEVKLVGYLLGDAPAGMKAVVDELNKKLKADINATIEFRYIGWGDLTSKYP
LVLAAGEDVDFIYSANWAFYNQEASKGAFREITQDDLQKFMPKHFAATSDVAWKEAAISG
KIFMIPTSTPDQKVPVTLIRGDLRKKYGVPEITKFKDIEPYLEAIKQNEKGMIPINADSQ
YDFAKSFYNYEWETGRATLDTVLITNGWSGVHTEWDDPSGKVYSQFDPYILDSMKASAKV
IKSWYDKGYINKNAISNKVRSKDAFEQGKSGVAYGNTNDIQGTLAKAAENGWEVEIIANL
SSKGTYPQDPYLNNGVSIAAGSKNPERAMMAMDLIMEDPSYNNLVYFGIEGVNYVVKDGK
IALPDGVTAESNTYPPDAAGFWFTNKSQHLPLASWNEQYIAHKQSLKNILVPYVYNAFAM
DTSKIKSELATMGTAGTQYQLPIQGGIVKDVDAAYATLEEKVKKAGLDAILAEANAQTQA
YLSSK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggttaagtccaaaatgtcgtttaccctcatttccgcgattatcgtattcacgttagtc
cttgcaggttgcggcaacaataaaaacaacgatcaagccaaggaaagcagcgccgcgcct
agcgcttccacttcatcggaggcatccgcaccggcatcggcaccggcttccgagtcggct
agtccggacaatgcgatcgatacttccgaagaggtcaagctggtcggttacttgctcggg
gacgcccccgcgggaatgaaagccgtagtcgacgagcttaacaaaaagctgaaagcggat
attaacgcgacgatcgaattccgctatatcggttggggagacctcacttccaaatatcct
ctcgtgctggccgcgggagaagacgttgattttatttattccgccaactgggcgttctac
aaccaagaagcttcgaaaggagcattccgcgaaattacgcaggacgatctccagaagttc
atgcctaagcatttcgcggcaacgagcgatgtcgcctggaaggaagcggcgatcagcggc
aaaatcttcatgattccgacttctacgccggatcagaaggtacccgtaacgctgattcgc
ggcgatcttcgtaaaaaatacggagtcccggaaatcacgaagttcaaagatatcgagcct
tatttggaagcgatcaagcagaacgagaagggcatgatcccgatcaacgcggacagccag
tacgatttcgccaagtcgttctataattacgagtgggaaacgggtcgcgcgacgttagac
acggtattgatcacgaacggatggtcaggcgttcatacggagtgggacgatccttccggc
aaagtctattcccaattcgatccttatattctggacagcatgaaagccagcgcgaaagtg
atcaaatcctggtatgacaaaggctacatcaacaaaaacgccatctcgaacaaagttcgc
agcaaggacgcgttcgaacaaggcaaatcgggggtcgcgtacggaaatacgaacgacatt
caaggcacgctcgcgaaagcggccgagaacggttgggaagtcgagatcattgctaacctc
tcgtccaaaggcacgtatccgcaagatccttacctcaataacggtgtatcgattgccgcc
ggttcgaaaaatccggagcgcgcgatgatggcgatggatctgatcatggaagatccttct
tacaataatctcgtttatttcggcatcgaaggcgtcaactatgtcgtaaaagacggcaag
atagcgttgccggatggcgttacggccgaatccaacacgtatccgccggatgccgccgga
ttctggttcacgaataagagccagcatttgccgctcgcttcttggaacgagcaatacatt
gcccataaacaatctttgaaaaacattttggtgccttacgtgtacaacgctttcgcgatg
gatacgtctaaaatcaagtccgagcttgcaacgatgggaacggccggaacgcaatatcaa
ttgccgatccaaggcggaatcgtcaaagacgtagacgccgcctatgccacgttggaagaa
aaggtgaagaaagccggcctcgacgcgatattggctgaagcgaacgcgcaaacgcaagcc
tatctatcttcaaaataa
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