Cohnella herbarum: HH215_15805
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Entry
HH215_15805 CDS
T08421
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cheb03016
]
HH215_15805 (rnz)
Enzymes [BR:
cheb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HH215_15805 (rnz)
Transfer RNA biogenesis [BR:
cheb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HH215_15805 (rnz)
Prokaryotic type
HH215_15805 (rnz)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QJD84495
UniProt:
A0A7Z2VKF7
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All DBs
Position
complement(3547297..3548232)
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AA seq
311 aa
AA seq
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MELWFLGTSAGMPISGRNVTSIALRMPQDRGTFWLFDCGEGTQHQLLSTPFRLSRLEKLF
ITHLHGDHLFGLPGILSSRASLGGTEPLELYGPPGLREFTETALRISETHLGYPLHIREI
EEGTVFEDGAFSVEAALLDHRIDSFGYRVVELPRVGALNTRLLAELGVPSGPAYGRLKSG
EDVVLEDGRTVRSSNVVGHPIAGRVVVVLGDTKPCPNAVKLAQGADLLVHEATFAHDLAD
KADEYGHATSVQAAETARDAEVGRLILTHFSSRYKPEDLAVLEAEARNTFLATDAAIELT
PYLIPRSSLSE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggagctttggttcttaggaacaagcgccggcatgcctatttcgggtaggaacgtgacg
tccatcgcgctgcgcatgccgcaggataggggaacgttctggttgttcgattgcggggaa
gggactcagcatcagttgttgagcacgcctttccgattaagccgcttagagaagctgttc
attactcaccttcacggcgatcatctcttcggacttccgggtatattaagcagcagggcg
tcgctaggcggaaccgaaccgttggagctgtacggaccgccgggactgcgcgagtttacc
gaaaccgcgttgcggatttccgaaactcatttggggtatcctttgcacattcgtgaaatc
gaggaaggaacggtgttcgaggatggggctttcagcgtagaagcagccctattggatcac
cggatcgatagcttcggatacagagtcgtcgagcttcctagagtcggagccctcaatact
cggttgcttgccgagttgggcgttccttcaggtcccgcttacggcaggctgaaatcgggc
gaagacgtggtattggaagacgggcggacggttcgctcatcgaatgtggtcggccatccg
atagccggtcgcgtcgtcgtggtattgggggatacgaagccatgccccaatgccgtgaag
ctggcgcaaggcgcggatctgttggttcacgaggcgacgttcgcgcatgatctcgccgat
aaagccgatgaatacggtcacgccacctcggtgcaggctgcggaaaccgcgcgggatgcg
gaggttggacggctgatccttacgcacttcagctcccgctacaaaccggaggatctggcg
gtcttggaagcggaagcgagaaatacgttcctggccacggatgcggctattgaattaacg
ccttacttgattccgagatcatccttgtcggaataa
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