Cohnella herbarum: HH215_16020
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Entry
HH215_16020 CDS
T08421
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HH215_16020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_16020
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
HH215_16020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SRP1_TIP1
GREB1_2nd
Motif
Other DBs
NCBI-ProteinID:
QJD84535
UniProt:
A0A7Z2VKA3
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Position
3601457..3603085
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AA seq
542 aa
AA seq
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MNRTKMKMKLLPALLAIVLLSTMTLSCSRSEPRPDQTTKALTPNEMQRQSEHMEISVALW
DLAENMTSYDPLVEQLEQKLNITIKPVPIGVANYVQQIQMWASSGQLPDIFSVDAVNSQY
YRNWRDRGVIQSLPSDLSAYPYLEQYLDFPDLQDLKDDGKLYFIPRQTFDSTDYNVLDRI
VIYRWDLAQQAGITKEPETWEEFRALLKAIVDNDPENKKITGLTSVGNLLLGGLFWLYSS
PAATSDGSGSDFKWIKEDGKYIPAVFSKHSIESLKLLRDFYTSGLIDPDLPVTRGDMGRD
KFAQGEAAALITAGGSMQAVDINIYKERWLKLHPDENAFYDKVKILKPLKAMDGNRYHAI
FKTFWSESYISSKVDAKKMERILQLFDYMNSPEFLEMRRFGLKDVDYTKIDDKITVIDPS
QSVLTKYKPFSSLANLLHWDGMFKLNPEFAGISPAAHEAQRELIDYSMKMTVKQDYDIRL
TKMSTPTKDSFTIFDSDDMVRVMISKLPVEVIWQDIIDGYKAKGLDRMIEEVNAKAKEMG
IE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgaataggaccaagatgaagatgaagcttctgcccgctctcttggcgatcgtgctcctc
tctaccatgacgctaagctgcagccgttccgagcctcgtccggatcaaacgaccaaagcg
ttaactccgaatgaaatgcagagacaatccgagcatatggaaatatcggtcgcgttgtgg
gacctggcggaaaatatgacgagctacgatccgttagtcgaacaactggagcagaagctt
aacattacgatcaaacccgtaccgatcggggtagctaactacgtgcaacaaattcagatg
tgggcttcatcgggccagcttcccgatattttttccgtagatgcggtgaattcccaatat
tatcgaaattggcgggatcgcggcgtcatccaatcgttgccgagcgatctgtccgcttac
ccttacctcgaacaatatttggattttccggatctgcaggaccttaaggacgacggcaag
ctttattttattccgcgccaaacgttcgatagcaccgattataatgtcttggatcgaatc
gtcatctacagatgggatcttgctcagcaagcaggcataacgaaggagcccgagacgtgg
gaagaattcagggcgctgctgaaggctatcgtcgacaacgatcccgaaaataagaaaatt
accggactgactagcgtaggcaatttgttgctcggcgggctgttctggctgtacagctct
ccggcggcaacaagcgatggaagcggaagcgacttcaaatggatcaaggaggacggaaaa
tatattcccgcggttttctccaaacactcgatcgaatctttgaaattgcttagagatttc
tatacctcgggattgatcgatcccgatctgccggttacgcgtggcgatatgggaagagac
aagttcgcccaaggcgaagcagccgctttaattacggcaggcggttcgatgcaagcggtc
gatattaacatttacaaggaacgttggctgaagctccatcccgacgagaacgctttttac
gataaagtcaaaattctgaagcccttgaaagcgatggacggtaaccggtatcatgcgatc
ttcaaaacgttctggtccgaaagctacatttcctcgaaagtcgatgccaagaaaatggag
cggattttgcaattgttcgactatatgaactcgcccgaatttctggagatgagacgtttc
ggattgaaggacgtggattacaccaaaatcgacgataaaattacggtcatcgatccttcg
cagagcgtgctgacgaaatacaaacctttctcctcgctcgctaatctgctgcattgggac
ggtatgtttaagctgaatcccgagtttgcggggatttcgcccgccgctcacgaagcccaa
cgggaactgatcgattactccatgaaaatgacggtcaaacaggattacgatattcgctta
acaaaaatgtccactccgactaaagacagcttcacgatcttcgacagcgacgacatggtc
agagtgatgatcagcaaactaccggtcgaggtgatctggcaggatatcattgacggttat
aaggctaagggactcgatagaatgatcgaggaagtgaatgctaaggctaaggagatgggc
attgaatag
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