Cohnella herbarum: HH215_16110
Help
Entry
HH215_16110 CDS
T08421
Name
(GenBank) AraC family transcriptional regulator
Organism
cheb
Cohnella herbarum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
dCache_1
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QJD84550
UniProt:
A0A7Z2VKB6
LinkDB
All DBs
Position
complement(3629421..3631817)
Genome browser
AA seq
798 aa
AA seq
DB search
MKTKFGGLPGFKLNKLFLRILLSFLSLLLPISIIGAFFYVSSTKNMEKDFSEKISVNLHS
SASTIGMYLRTVQETNTLFFNDNAIRTLLQPDRLYTLEERSRLSIVPQTIARIQSLLSDY
VDRIFVFVDDERVYTNEGVEDFELFFGKTYPLDRYSTSRWAEMLRGERILEILEPAKAHV
SPSKTIPTLPILTRNTVRGHDVVMVVTMSLQTMRSTLMNNAIFPTTEFLLLDSNGNFILS
TSDRFSESEAMEAIAEHSAIKGQSYENVAIGGEDYLVSTVKDENYGWNYYSITPTREFTE
NAGQITKLIVAICIVLTVVGIAFSVVFTLNLYNPIKKIRDILLQSDESENGNGKLPDSKR
IPNDEFDMIGRRINQIMENNSYFQNKLNALSDEYVDSALQHLLRGGYGGGSQEGKLCRLV
EKHFKDADGVFVCSCVRFKFHDVFFTEIQDTERIGIQSKLKNVVWGLVGEHIPTYVVEYQ
HNVFACIVRLPKDEGLERLKKALRRLTETFRYDARYCVMNAGIGKPYEGVEQLGRSFGEA
LSVLGYQDSNQAFQVLDTAEHPTQQIVYSYSMTDENKIVNALKTGDKELLRRQLDEQIER
NRLSGVSPDNLSLLLTELYNTGKRYLSEKGLQLFQMITEEEDGVLRGSGNYTIEFERRRE
CLAAFYERIVDQTGIPKEKGSGMLITMIMEYIENNYHHDLYLEKIAEEMGTSAKYLSKVF
KEKTKMNLTDYISYNRIARSKTLLLETDMSINEISGKVGIYSRTTFLRLFKKYEGISPSQ
YRESGIQQSTFAELTVES
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaattcggcggattgccgggatttaagctaaataagctattcttgcgaatt
ctgctatccttcctttctctactccttccgatctcgattatcggcgcgttcttttacgtt
agctctacgaaaaacatggagaaggacttctcggagaaaatctccgtcaatcttcactcc
tcggctagcacgatcggcatgtatttacggacggtgcaagagaccaacactttgtttttc
aacgataatgccattcgaacgttattgcagcccgatcgattgtatacccttgaggagcgg
tcgaggttatcgatcgttccccaaacgattgctcgaattcagagcctgctttccgattac
gtggatcggattttcgtattcgtcgatgacgagagggtgtatacgaacgaaggagtcgag
gatttcgagcttttcttcggtaaaacctatccgctcgatcgctattctacctcacgttgg
gcggaaatgctgcgaggcgagaggatactggagatcttagaacccgcgaaggcgcatgta
tccccgtccaagacgattccgacgcttcctatcctgacccgcaacacggtaagaggacat
gacgtcgttatggtcgtgaccatgtctctgcagacgatgagatcgacgttgatgaataac
gcgatcttcccgacgaccgaatttctattgcttgattcgaatggcaactttattttatcg
acctcggatcggttctcggaaagcgaagcgatggaagcgatcgctgaacattccgcaatt
aagggacaatcttacgaaaacgtcgccatcgggggagaagattatctcgtttctacggtt
aaagacgagaattacggctggaactattattcgatcactccgactagagagtttaccgag
aacgctggccaaatcacgaagttgatcgttgcgatctgcatcgtgttaaccgtcgtcggt
atcgctttctccgtcgtatttacgttgaatttatacaatccgatcaagaagattcgggat
attttacttcaaagcgacgagagcgagaatggtaacgggaagttgcccgattcgaagaga
attcctaacgacgaattcgatatgatcggaagaaggattaaccagatcatggagaacaat
tcctattttcagaataaattgaatgcgctttccgacgagtatgtcgatagcgcgcttcaa
catttgttacgcgggggatacggcgggggaagtcaggaagggaagctgtgcagactcgtg
gagaagcatttcaaagatgcggatggcgtattcgtgtgcagttgcgtacggttcaagttc
catgacgtcttctttaccgagattcaggacaccgaacgaatagggatccagagtaaattg
aagaacgtagtttggggactcgtcggcgagcatatcccgacatacgtggtggaatatcaa
cacaacgtattcgcttgcattgtaaggttaccgaaggatgaaggattagaacgcctgaag
aaggcgctgcgcagattgacggaaactttccgatacgatgcgcgctactgcgtcatgaat
gcggggatcggcaagccgtatgagggagtggaacaactcgggagatcgttcggagaggca
ttgtccgtgctaggttaccaggattccaatcaggctttccaagtgctggatacagccgag
catcctacgcaacagatcgtttactcttattccatgaccgacgagaacaaaatcgtgaac
gctttgaaaaccggagacaaggagctcttgcggcgacaattggacgagcagatcgagcga
aatcgattgtcgggcgtatccccggacaatctgagcttgctgctgacggagctctacaac
acgggcaagcgttatttgtccgaaaagggtttgcaattgttccagatgattacggaggag
gaagacggggtgctgcgagggagcggcaattatacgattgaattcgagagaaggcgggaa
tgccttgccgctttctatgaacggatcgtggaccaaaccggcattccgaaggaaaaaggc
tcgggcatgttgattacgatgattatggaatacatcgagaacaattaccaccatgatctg
tatttagagaagatcgcggaagagatgggtacgtccgctaagtatttgtccaaggtgttc
aaagagaaaacgaaaatgaatttgaccgattatatcagctacaatcgaatcgcgagatcc
aagacgctgttgctcgaaacggatatgagcatcaacgagatttcgggcaaggtcggcata
tatagccgaacgactttcttgaggctcttcaagaaatacgaggggatttctccttctcaa
tatcgggagtcggggattcaacagtccaccttcgccgagcttacggtagaatcatga
DBGET
integrated database retrieval system
