Cohnella herbarum: HH215_17170
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Entry
HH215_17170 CDS
T08421
Name
(GenBank) ABC transporter substrate-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HH215_17170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_17170
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
HH215_17170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
Motif
Other DBs
NCBI-ProteinID:
QJD84746
UniProt:
A0A7Z2VK74
LinkDB
All DBs
Position
complement(4018954..4020459)
Genome browser
AA seq
501 aa
AA seq
DB search
MFKGKNKIGKSFAVILGASMIVSTFSAGAATSTLPEYKLSLYYPGSPAKDEAKVEAKINE
HLKGKINATIDLVPIDWGQWDSKMNLLKASREPMDIIFTAQWNGHANDVAKQVFLALDDP
KGPNGNLIEKYGKDITKSLDPAFLAGAKVNGHNYGIPTNKELAAQGGVIYRKDIADKLGL
TAKLNAVKTVADLDPILAEVKAKQPGMTPLFLRDGDNFNAHYFIQHDFLGDTTIEGLIRK
DGTSTKVITRFDDKKYMDQLALTRSFYKKNYINKDAATTQLSGQDALKKGNVFMITASLK
PGKDAETAIAAGLAGKLKQINMTERTVSTGETAGSMLGISSTSKDPARAMMFINLLHSDK
YLNNLLNFGIQGEHYLRTSGEIIKPGPSAANYNPGATWMFGNQFLNYVWDTEASNKWAQF
KNFNRGAKLSPALGFTFDAQPVKSQTASLVTVRKTYIAGLETGSIDPSKAAEFKKKEEAN
GLAKVLQEKQKQLDAFIASKK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagggaaaaacaagattggcaaaagcttcgccgtaattctgggagcaagcatg
atcgtgtccacgttctcggctggcgcggcaacgtcgacgctgccggaatacaagctttcg
ttatactacccaggctctcctgcgaaggacgaggctaaggtagaagccaagatcaacgag
catctcaaaggtaaaatcaatgcaacgattgatcttgtgccgatcgactggggacaatgg
gacagcaagatgaacctgttgaaagcaagccgcgagccgatggatattatcttcacggcg
caatggaacggccacgccaacgacgtagccaagcaagtattcctagcgctcgacgatcct
aaaggtcctaacggcaacttgatcgagaaatacggcaaggatatcacgaaatccctggac
cctgccttcttggcgggtgccaaagtaaacggccataactatggcattcctacgaataaa
gaattagcggcgcaaggcggagtcatctaccgtaaagatatcgccgacaaactcggcttg
accgctaagttgaacgcagtgaagacggtagccgatctcgatccgatcctggcagaggtc
aaagctaaacaaccgggcatgactccgctgttcttacgcgacggagacaacttcaacgct
cactatttcatccaacacgacttccttggcgatacgaccatcgaaggtttgatccgtaaa
gacggcacgagcacgaaagtcatcacgagattcgatgacaagaagtacatggaccaattg
gcgcttactcgttccttctacaagaaaaactatatcaacaaagatgctgcaacgacgcaa
ttgtccggtcaagacgcgctcaaaaaaggcaacgtgttcatgatcacggcatccctgaag
cctggaaaagacgcagagaccgcaatcgcggcaggcttggcaggcaaactgaaacaaatc
aacatgactgaacgcaccgtatcgaccggcgaaaccgcgggttcgatgttgggtatctct
tctacttccaaagatcctgcaagggcgatgatgttcatcaacctgttgcactccgacaaa
tatctgaacaacctgcttaacttcggtattcaaggcgagcattacttgagaacttccggc
gagatcatcaaaccgggtccaagcgcggctaactacaacccgggcgcaacttggatgttc
ggtaaccaattcctgaactacgtatgggatacggaagcttcgaacaaatgggctcaattc
aaaaactttaacagaggcgcgaaattgtcgccggcactgggctttacgttcgacgctcaa
ccggttaaatcccaaacggcgtcgctcgttaccgtaagaaaaacatatatcgcaggtcta
gaaacaggatcgatcgatccgtccaaagcagccgaattcaagaaaaaagaagaagctaac
ggactggctaaagtgcttcaagagaaacaaaaacaacttgacgcgttcatcgcttcgaag
aaataa
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