Cohnella herbarum: HH215_17665
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Entry
HH215_17665 CDS
T08421
Name
(GenBank) ROK family transcriptional regulator
Organism
cheb
Cohnella herbarum
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ROK
MarR_2
HTH_IclR
HTH_24
TrmB
Motif
Other DBs
NCBI-ProteinID:
QJD84833
UniProt:
A0A7Z2ZM98
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Position
4139546..4140706
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AA seq
386 aa
AA seq
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MSTPTGDQALIKRINTAIVLEYILRGAPLSRAQISEQSGLNKATVSSLVQDLIDGSLVKE
IGTGQSSGGRKPVMLEFIATSGYAIGVDLGVNYIRGVLTDLRGNLVAERTSSLRHPEPEV
AVEQLCGCIETLMGEAPASSYGIIGIGVGVPGLVDDKGTILFAPNLKWRDVPLQRLLTER
FALPVTIDNEANMGALGEQKYGAGRSINNLIYVSVGIGIGTGLILQKSLYKGASGFSGEM
GHLSVEAHGKNCTCGNRGCWEMYASEQALLEQAADLGFEDLEALLSAASAGRQDVLDLFS
GIGEYLGIGIANIVNVFNPDAVVIGNRMSQARPWLEGILRQTVVQRALGFHLRKVQLLFA
ELGERSSMMGAAEVAIAGFFTRVKAT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacccacaggagatcaagctctaatcaaacgaattaacacggctatcgtgttg
gaatatattttgcggggggcgccgctttcccgtgcgcaaatctccgaacaatcggggctg
aacaaggcgaccgtttccagtctcgtccaagatctgatcgacggctcgttggtcaaagag
attggcacgggacaatccagcggcggacgcaagcccgttatgctggaattcatcgcgacg
tcgggctatgcgatcggcgtcgatctaggcgttaactatatccgcggagtgttaacggac
ttgcgggggaacctcgttgcggagcgtacctcctcccttcgtcatccggagccggaggtc
gccgtggaacaactgtgcggttgcattgagacgcttatgggagaagcgccggctagttcg
tacggcattatcggcatcggagtcggagtcccgggactcgtcgacgataaggggacgatc
ctgttcgcccctaacctcaaatggcgtgacgttccgctgcaacgcttgttgaccgaacgt
tttgccctgccggtcaccattgacaacgaggcaaacatgggcgcgctcggggaacagaaa
tacggagccggccgcagcatcaacaacttgatctacgtcagcgtcgggatcggcatcggt
acaggtctaattctgcagaagtctctttacaagggcgcatccggcttttccggcgaaatg
ggccatctatccgtcgaagcgcacggcaaaaactgcacgtgcgggaaccgcggctgctgg
gaaatgtacgcctccgagcaagcgttgctcgagcaggctgccgacctcggcttcgaggac
ttggaggcgttgctgtccgctgcctcggcgggacggcaagacgtgctcgacctcttctcg
gggatcggcgaatacttgggcatcggcatcgcgaacatcgtcaacgtgtttaatcccgat
gccgtcgtcatcggcaaccgaatgagccaagcccgcccatggttggagggtatcctgcgc
caaacggtcgttcagcgcgcgcttgggtttcatttgcgcaaggtgcagcttctgttcgcc
gagctgggcgaacgctcctcaatgatgggagccgcagaagtcgccatcgccggcttcttc
acccgggtcaaggcgacttaa
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