Cohnella herbarum: HH215_19490
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Entry
HH215_19490 CDS
T08421
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cheb
Cohnella herbarum
Pathway
cheb03420
Nucleotide excision repair
cheb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH215_19490 (pcrA)
03430 Mismatch repair
HH215_19490 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cheb03400
]
HH215_19490 (pcrA)
Enzymes [BR:
cheb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH215_19490 (pcrA)
DNA repair and recombination proteins [BR:
cheb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH215_19490 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HH215_19490 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
MSSS
Motif
Other DBs
NCBI-ProteinID:
QJD85139
UniProt:
A0A7Z2VLI6
LinkDB
All DBs
Position
complement(4563498..4565888)
Genome browser
AA seq
796 aa
AA seq
DB search
MFFERDNTNAIDIDASINKLNPKQKEAAIATNGPLLIMAGAGSGKTRVLTHRIAYLISKR
LAAPWSILAITFTNKAAREMQDRVSKLIGPSGRDIWVSTFHSMCVRILRKDIERIGFGSN
FSILDSTDQLSVIRNVMKDNNIDVKKFEPKAVQAAIGAAKNELLTPAQYEQRQGDFFETI
VAKVYTQYQRRLKANNSLDFDDLLLLTIQLFKDVPEVLEFYQNKFKYVHVDEYQDTNRAQ
YTLCKMLAEKHHNICVVGDSDQSIYRWRGADITNILNFEADYPEAQSILLEQNYRSTSNI
LDAANAVIKNNMGRKAKNLWTDQNGGDKIIVYQGDSEHEEGYFIAGEIRKNRQNARRYGD
HAILYRTNAQSRVVEEILIKSEIPYQIVGGIKFYDRKEIKDILSYLRLISNPDDDNSLNR
IVNVPKRGLGDTTMAKVQEEATRKGVSMLKVLNEGDGLLGDGLYHLDIQTRAKAALSEFR
DLIRNLSAMVEYLSVTELTEKLLELTEYRLELQRENTLESKSRLENIEEFLSVTQEFEKR
NEDKSLVSFLTELALVADIDSMDDDDEDSGDAVTLMTMHSAKGLEFPIVFIVGMEEGLFP
SSRSFMDNEEMEEERRLAYVGITRAEKKLYLTCARMRLLYGRTSTNAPSRFLEEIPSELK
EAVEPAGGGRSGSYGGYSSRLGGGNGGGGGYGARSASPSSAGGGYPPSGFGARPTIAPTN
GGSGASVVRPQTPSASKPVGDGMAIVAGDKVQHAKWGVGTVVAVKGTGNDAELQIAFPAP
TGVKRLLAAFAPVTKI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgaacgggataatacgaacgcgatcgatatcgatgcttcaattaataagcta
aatccgaaacagaaggaagcggccattgcgaccaatggtccgttgctgattatggccgga
gcgggaagcggtaaaacccgggttcttacgcaccgtatcgcttatttgatttccaagcgc
cttgccgctccgtggagcatattggcgatcacctttacgaataaagccgcgcgagagatg
caagaccgggtttccaagctgatcggtccgtccggcagagacatctgggtaagcaccttc
cactccatgtgcgtgcggattttgcgcaaagacatcgaacgtatcggattcggctcgaat
ttcagcattctggattctacggatcaactgtccgtcattcgtaacgtgatgaaggacaac
aatatcgacgtgaagaagttcgaaccgaaagcggtgcaggcggcgatcggcgcggcgaag
aacgaactgctaaccccggcccagtatgagcaacggcaaggcgactttttcgaaacgatc
gtggccaaggtttacacgcaataccaacggagacttaaagcgaacaactcgcttgacttc
gacgaccttcttcttctgacgattcaattgttcaaggacgttcctgaagttttggagttt
taccagaacaaattcaaatacgttcacgtcgacgagtatcaggatacgaacagagcgcag
tatacgttatgtaaaatgttggcggagaagcatcacaacatctgcgtggtcggggatagc
gatcagtcgatctaccgctggcgcggagcggacattacgaacattctgaacttcgaggcc
gattatccggaagcgcagagcattttgctcgagcagaattaccgttcgacctctaatatt
ctggacgcggctaacgcggtcattaagaacaatatgggtcgcaaagcgaaaaacttgtgg
acggaccagaacggcggagacaagatcatcgtgtatcaaggcgattccgagcatgaggaa
ggttacttcattgccggcgaaattcgcaaaaaccgtcaaaacgctcgccgttacggagat
catgcgattctctatcggaccaatgcgcagtcccgggtcgtggaggaaattctgatcaaa
tcggagattccttatcagatcgtcggcggcatcaagttctacgatcgcaaagagattaaa
gacattctttcttatcttagattaatttccaacccggatgacgataacagccttaaccgg
atcgtgaacgtgccgaagaggggcttaggcgatacgacgatggctaaggttcaggaagaa
gcgacccgtaaaggggtgtcgatgcttaaggtgctgaacgaaggagacggcttgcttggc
gacgggctgtatcatttggacattcagacccgcgctaaggccgcattatcggaattccgc
gatctcattcgtaacctaagcgcaatggtcgaatatttatccgtgacggaactgacggag
aagttgctcgagctcaccgaataccggttagagctgcagcgcgagaacacgttggaatcg
aagtcgaggctggaaaatatcgaagagttcctatcggtaacgcaagagttcgagaaacgc
aacgaagacaagtcgcttgtttctttcttgacggaattggctttggttgcggacatcgac
tcgatggacgacgacgatgaagacagcggagacgcggtcactctcatgacgatgcatagc
gccaaaggcttggagtttcccatcgtgttcatcgttggaatggaagaggggttattcccg
agcagccgttcgttcatggacaatgaggagatggaagaagagcgcaggctagcttacgtg
gggattacgcgagcggagaagaagctttacttaacttgcgcccgaatgagacttctgtac
ggtcggacgagcacgaatgcgccttcgcgttttctggaagaaattccgagcgaactgaag
gaagcggtcgagcctgccggaggaggacgctcgggatcctacgggggttacagctcccgc
ttaggcggaggtaacggcggcggaggcggatatggtgcgcgttctgcctcgccgagttcc
gccggaggggggtatccgccttcagggttcggcgctaggccgaccattgctccgacgaac
ggaggtagcggcgcttcggtcgttcgaccgcagacgccttccgcttccaagcccgtaggg
gacggaatggccatcgtggccggagataaggttcagcatgcgaagtggggcgtcggcacg
gtcgttgccgtgaaggggacgggcaacgatgccgagctgcaaattgcgtttcctgcgcct
accggcgttaagcggttgttggccgcatttgccccggtgacgaaaatataa
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