Cohnella herbarum: HH215_20045
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Entry
HH215_20045 CDS
T08421
Name
(GenBank) DEAD/DEAH box helicase
Organism
cheb
Cohnella herbarum
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Flavi_DEAD
TrwB_AAD_bind
AAA_30
OHCU_decarbox
Motif
Other DBs
NCBI-ProteinID:
QJD88252
UniProt:
A0A7Z2ZRN1
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Position
complement(4690362..4692398)
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AA seq
678 aa
AA seq
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MADRACKLLNARWDKESSPVGKQVDETNSDWVEVFGQAVGIAWAGFNHEGGGSPEIVQVK
SMITRPKVARELAEAARLAGELLAGRSLLKEEATQLLASVSSIATADPLAVLQQASLAGA
LQLAAAVAPLPAAPPQSGFRGWASRLRLARLYGPGGKPSRPEELICGRCGSGRDKLRRTP
CAACGQACAYCEACLAMGRSRECELLVIGVPRQGAEQSRLSVASRNAGHSRSFFSAPQGS
VQSYLPVVLSNASQSPSSLSAPQLADPSRLSEPSRNAALSPDSFSAHNNARSAQNVSLPT
SNETTPNLTDRWGLSPAQSDAAAKALAYLNAPYETRIGHSFLLWAVTGAGKTEMIFPLLE
AVLARGGRALVATPRRDVVLELAPRLAKAFPHYERVVLYGGSADRWENGALTLATTHQLM
RFQEAFDLVLIDELDAFPYHNDAMLHYAADKCRKKRGTTVLLSATPPLPLQRAAAKGRLP
NARVPVRYHRHPLPVPQRVTLASVTDMLRKQNLPPKLVKPLQHSIQRGAQIFLFVPYVKQ
VEPIVQLLRRYAQQLRISPLAISGTSSKDEVRTEKVVSFREHAIQLLVTTTILERGVTIP
KSDVYILDAHNRLFDAASLVQMAGRAGRSAADPYGGVFFGAPEWTSSQRGAIRQINEMNG
LAKRRGYFTPSLEPDPVR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcgggcatgcaaattgctgaatgcgcgttgggataaggaatcgagtccggtt
ggaaaacaagtcgacgaaacgaactcggattgggtggaagtattcggacaggcggttgga
attgcatgggctggcttcaatcatgagggagggggctcacctgagatcgtacaagtgaaa
tctatgattacgcgcccgaaagttgcgagagagctcgcggaggcagcccgcttggccgga
gagctccttgcaggtcgctccctgctgaaggaagaagcgactcaactgcttgccagcgtt
tcgtccattgcgacggcggatcctctcgccgtcctgcagcaagcttcgcttgccggagcc
ctgcagctcgccgctgccgtggcccctctcccggccgctccgccgcaaagcggcttccgc
ggttgggcttcgcggctgcgcctcgctcgcctctacgggccgggcggcaagcctagccgg
cccgaagagctgatctgcggccgctgcggtagcggcagggataagctgcgacgcacgcct
tgcgccgcctgcggacaagcctgcgcttattgcgaggcttgtttagcgatggggcgcagc
cgcgaatgcgagctgctcgtcattggcgtgccgcggcagggtgctgagcaatcgcgtctg
tccgtggcttcgcgtaacgctggacactcacgtagctttttttccgcgccgcaaggctct
gtgcaatcgtatctgcccgttgttctaagcaacgcctcacaatcgcccagctcattatcc
gcgccgcaactcgccgatccatcacgtctgtccgagccttcgcgtaatgctgccctatcg
cctgactctttttccgcgcacaacaatgcacgttccgcacaaaatgtttccctccccacc
tccaatgaaaccaccccaaacctcaccgatcgctggggactaagccccgcccaaagcgac
gcagccgccaaagcgctagcttatctgaacgctccgtacgaaacacggataggccattct
ttcctgctctgggcagtcacgggcgccggcaaaaccgaaatgatatttccgctgctggaa
gcggtgcttgcccggggcgggcgggcgctggtggcgacccctcgcagagatgtcgtgctc
gagcttgcgccaaggcttgctaaagcttttccgcattacgaacgcgtcgtcctgtatgga
ggaagcgccgatcgctgggagaatggggcactaacgctggccacgacgcatcaattaatg
cggtttcaggaagcattcgacctcgtgttgatcgatgagttggatgcgttcccctatcat
aacgatgccatgcttcactacgcggcggacaaatgccgcaagaaaagaggcaccaccgtc
ctgctcagcgcgactcctcctttacccttacagcgggcggcagccaagggacgactcccg
aatgcgagagtcccggtgagatatcaccgccatcccttgccggtaccgcaacgcgtcacc
ctcgcgtcggtcaccgatatgcttcgcaaacaaaacttgccgccgaagctagttaaacca
cttcaacattctatccagcgcggcgcgcaaatttttctgttcgttccctacgtcaaacaa
gtcgaaccgatcgtccagcttcttcggcgctacgcccaacagcttcggatttcgccgcta
gccatatcgggcacctcctccaaagacgaagtacgcacggaaaaagtcgtttcgtttcgc
gagcacgctatccaattgcttgtgacgactacaatccttgagcggggagtaacgattccc
aagagcgacgtgtatattttggatgcccataatcgcttgttcgacgctgcatcgcttgtt
caaatggccggaagagccggtcgttcggctgccgatccatacggaggagtgtttttcggg
gctcccgaatggacatcatctcagcgcggagcgatccggcaaattaacgaaatgaacgga
ttggccaagcggcggggatatttcacgccatcgttagagccggatcccgttcgctga
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