Cohnella herbarum: HH215_20060
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Entry
HH215_20060 CDS
T08421
Name
(GenBank) response regulator transcription factor
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
cheb
Cohnella herbarum
Pathway
cheb02020
Two-component system
cheb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HH215_20060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HH215_20060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cheb02022
]
HH215_20060
Two-component system [BR:
cheb02022
]
NarL family
DegS-DegU (multicellular behavior control)
HH215_20060
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Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
XFP_C
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QJD85240
UniProt:
A0A7Z2VLN3
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All DBs
Position
complement(4694541..4695263)
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AA seq
240 aa
AA seq
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MENKTAVRKIKVLLADDHQLFREGLKRILNMENDLEVIGECGDGIQVLEFCNKEKPDVVL
LDINMPTENGVVATERLRDIFPEIKVIILSIHDDESYVFETLRKGATGYLLKDMEAESLI
NAIRTVAEGHAYIHPKVTGKLINQLRRMTYLDEIGATSGAAASRETVTKFIPRGNNPLTR
REAEVLRLMAEGKSNKTIGENLFISEKTVKNHVSSILQKMEVDDRTQAVINSIKYGWVTL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaacggctgtacgtaagattaaagtactccttgccgatgatcatcagctt
tttcgggaagggcttaagcgaatactaaacatggagaacgatttggaggtcatcggagaa
tgcggtgacggaatccaggtactcgagttctgcaacaaagaaaagccggacgttgtcctg
ctcgacatcaacatgccgacggagaacggcgtagtggcgaccgagaggcttcgcgatatt
tttccggagatcaaggtgatcatcctctctatccacgatgacgagagctatgtgttcgaa
actcttcgcaagggcgcgacgggttatctgctcaaggacatggaagcggaatcgctcatc
aatgccatccgcacggtggcggagggacatgcatacatacatccaaaggtaacgggcaaa
ttgatcaatcagcttcgccggatgacctatctcgacgagatcggcgcgacgtccggagct
gcggccagccgggagacggttacgaaattcatcccgcgcggcaacaacccgcttactcgc
cgcgaagcggaggtgcttcgcttgatggccgaaggcaagagcaacaagaccatcggagaa
aatctcttcatcagcgagaaaacggtcaaaaaccacgtcagcagcattttgcagaaaatg
gaagtggacgatcgtacgcaagcggttatcaactcgatcaaatacggctgggttactctt
taa
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