Cohnella herbarum: HH215_20100
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Entry
HH215_20100 CDS
T08421
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cheb
Cohnella herbarum
Pathway
cheb00521
Streptomycin biosynthesis
cheb00523
Polyketide sugar unit biosynthesis
cheb00525
Acarbose and validamycin biosynthesis
cheb00541
Biosynthesis of various nucleotide sugars
cheb01100
Metabolic pathways
cheb01110
Biosynthesis of secondary metabolites
cheb01250
Biosynthesis of nucleotide sugars
Module
cheb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HH215_20100 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HH215_20100 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HH215_20100 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HH215_20100 (rfbB)
00525 Acarbose and validamycin biosynthesis
HH215_20100 (rfbB)
Enzymes [BR:
cheb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HH215_20100 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Statherin
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QJD85248
UniProt:
A0A7Z2VL34
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All DBs
Position
complement(4706775..4707755)
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AA seq
326 aa
AA seq
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MRLLITGGAGFIGSNFIHYLRREHPSYEIVNVDLLTYAGNPDNLSNVEVSRQYRFIQADI
ADSDAMEILFADGIDSIVNFAAESHVDRSITDPGIFVRTNITGTQALLDLAIKYKVPKFL
QISTDEVYGSLGAEGLFSEVTSLAPNSPYSASKAGADLLVRAYHETYGLHVNITRCSNNY
GPYQFPEKLIPLMIRNALDNKPLTVYGDGLNIRDWLYVEDHCNAIALVLHQGRAGEIYNI
GGNNERTNLQVVRTILQELGKPESLIHYVEDRLGHDRRYAIDATKIRNELRWQPKYEYET
GIKSTIKWYRENGEWLNRIATGAYQL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagattgcttataacgggaggggccggatttatcggcagcaacttcatccattatttg
aggcgagagcacccatcctatgagatcgtgaatgtggatttactaacttatgccggcaat
ccggataatttatccaacgtcgaggtgtcccggcaatatcgtttcatccaggcggacatt
gcggattcggatgccatggagatcttattcgctgatggcattgactctatcgtgaatttt
gccgcggaatctcacgtggatcgcagtattacggatcctgggatattcgtaaggacgaat
attactggcacgcaagcattgttggatctagcgataaaatacaaagtgcccaagtttttg
caaatttccacggacgaggtgtatggaagtcttggggcagaggggttattttcagaggtg
acgtcgcttgctccgaatagtccttattccgcaagcaaagcaggggcagatctgctcgtt
cgcgcttaccacgagacgtatggtttgcacgtcaatattacccggtgctccaacaattac
ggcccttatcaatttccggaaaagcttatccctcttatgatacgcaacgcactggataat
aaacctttaactgtctatggggacggcttaaatattagggattggttatacgtggaagac
cactgcaatgcaattgctcttgtgcttcatcaagggcgcgctggggagatttacaatatc
ggggggaacaatgaacggacgaacctgcaagtcgtccgtacgatcctccaagagcttggc
aagccggagagtttaatacattatgtcgaggatcggttaggtcatgaccgtcgttatgcg
attgatgcgacgaagattcgcaatgaacttcgttggcagcctaagtacgagtacgaaacg
ggtattaaatcaactattaaatggtaccgggaaaacggggaatggttgaaccgaatcgct
accggagcttatcaattatga
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