Cohnella herbarum: HH215_20320
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Entry
HH215_20320 CDS
T08421
Symbol
spoIID
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cheb01011
]
HH215_20320 (spoIID)
Enzymes [BR:
cheb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HH215_20320 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
cheb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HH215_20320 (spoIID)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
QJD85286
UniProt:
A0A7Z2VL41
LinkDB
All DBs
Position
complement(4758919..4759878)
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AA seq
319 aa
AA seq
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MQAEAQQKTKNEPDYEKHQPVLEEKEVQPIVRVLLSKTRSIEPVPLEEYVKGVVAAEMPL
DFQPEALEAQALAARTYIVRRLTLNDRSGVTGVEADVTDTQAHQVYRSLAEMKRLRKNDE
EGWRKVDEAVKNTEGDIIAYRGQPIEALFFSTSNGYTENSEEVFPNEIPYLRSVASPWDK
ERSPRAINRVEMPLSEFYRKLGVDAIAVSAAGTDKPSLRIMEWTQGRRVKEMVAGSKRIS
GEEVREKLGLRSAAFDWTIEKGMIILTTYGSGHGVGMSQWGAEGMAQTGKTADQIVEYYY
SGARVEKVSKLANSSKNRL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggaggcgcaacagaaaacgaagaatgagcccgattacgagaaacatcaacca
gtcttagaggagaaagaagttcaaccaatcgtccgagtattattatcgaaaactcggagc
attgaacccgtaccgttagaagagtacgttaagggggtagtggcggctgaaatgccgctt
gatttccaacctgaggcgctcgaggcgcaggcgcttgctgcccgcacctatattgtgcgc
agacttacgctgaatgaccgtagcggcgtaacgggggtcgaggcggatgtgacggatact
caagctcatcaggtttatcggtctctagcggaaatgaaacgacttcggaagaacgatgaa
gaaggctggcgcaaagtggatgaggccgttaagaataccgagggtgatatcatcgcttat
cgcgggcaaccgattgaggcgttatttttttcaacaagtaacggttatacggaaaattcg
gaagaggttttcccgaatgagattccttatctgcgatcggtcgcaagtccgtgggataaa
gaacgttctcctagagcgataaatcgagtagagatgcccttgtcggaattctatcgaaag
cttggagtggatgcgattgcggtaagcgcagccgggacggacaagccgagcctacggatt
atggaatggacgcaaggaagacgagtgaaggaaatggtagcgggatccaagagaatatcc
ggtgaagaagtacgcgaaaagctaggtttgcgttccgccgcattcgattggacgatagag
aagggtatgatcatcctgacgacttacggcagcggacatggcgtcggaatgagccaatgg
ggggcagaagggatggcgcagacggggaaaacggcggatcagatcgtcgaatactactat
tcgggcgcgcgggtggagaaagtttcaaagcttgcgaatagctcgaaaaacagactgtaa
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