Cohnella herbarum: HH215_21040
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Entry
HH215_21040 CDS
T08421
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cheb03000
]
HH215_21040
Transcription factors [BR:
cheb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HH215_21040
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Peripla_BP_3
LacI
HTH_7
HTH_23
HTH_3
HTH_38
HTH_24
MarR
Sigma54_DBD
Fe_dep_repress
HTH_11
Sigma70_r4
TnsD
HTH_Tnp_ISL3
Phage_terminase
HTH_10
Rv2175c_wHTH
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QJD85417
UniProt:
A0A7Z2ZNV5
LinkDB
All DBs
Position
complement(4908560..4909576)
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AA seq
338 aa
AA seq
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MVVQLKDIAKRLNISISTVSRVINDTGRVNKDTRDLILKTIKEMGYQPNEVARSLKRKSA
NTLGVIVPDLSNSFYASVIKGVEKVARENEHSVIVCNSDEDILKEEEYVQLLLQKQVTGL
VIATVGGNPELFEQYKRSGIPFVFIDNLPNTQENFDVVTIDNVKAGYDLAKHLVEQGHEK
LAIITGPQNQSTAAERLLGFRKCLEDNGIDIREKWIGVGEFRRESGYDIMNEWLKQEELP
TAIFAANDFLLYGAIRAILEKGLSIPQDIAAVCFDANDETGLVRPQITSIIQPAHMIGAI
AGEIIMRKEKNKNLKVFEKVVLEPKLIINESSQIQTGR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgttcaattaaaggatattgccaaacgtttgaacatttcgatttccaccgtatcc
agagtcattaacgacactgggagagtgaacaaggatacccgcgatttgattctcaagacg
atcaaagaaatggggtatcagccgaacgaggttgcccggagtctgaagcgcaagagcgcg
aatacgctcggcgtaatcgttccggatctctcgaacagcttctatgcgagcgtgatcaag
ggcgtagagaaggttgcccgggagaacgagcattccgtcatcgtgtgcaatagcgacgag
gatattctgaaggaagaggaatacgtgcagcttcttcttcagaagcaagtaactggtctt
gttattgcgaccgtaggcgggaacccggagttgttcgaacaatacaagcgatcgggcatt
ccgttcgtcttcatagacaacttacctaacacgcaagagaatttcgacgtcgtaacgatc
gacaacgttaaggcgggatacgaccttgcgaagcatttggtcgagcaaggccatgagaag
ctcgcgatcattaccggaccgcagaatcaatcgacggcggcggagcgcttgctcggattt
cggaaatgcctggaggacaacggaatcgatatccgcgaaaaatggatcggggtcggcgag
tttaggcgtgaaagcggttatgacatcatgaacgagtggcttaagcaagaggaattgccg
accgcgattttcgccgctaacgatttccttctctatggggcgataagggcgattctggag
aagggactaagcattccgcaagatatcgccgccgtatgcttcgatgccaacgacgagacc
ggattagtcaggcctcagatcacgtcgattattcaaccggcgcatatgatcggggctatc
gccggggagatcatcatgcgcaaggagaagaacaagaatctgaaagtgttcgagaaggtc
gtgctcgagccgaagctgatcattaacgaatcaagccaaattcaaaccgggagatga
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